Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Adipose tissue RNAseq in T-cell-specific IFNAR-deficient mice.

ABSTRACT: Adipose tissue RNAseq in T-cell-specific IFNAR-deficient mice.

PROVIDER: PRJNA486902 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR9150110.fastq.gz	Fastqsanger.gz
	SRR9150111.fastq.gz	Fastqsanger.gz
	SRR9150112.fastq.gz	Fastqsanger.gz
	SRR9150113.fastq.gz	Fastqsanger.gz
	SRR9150104.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Adipose tissue RNAseq in T-cell-specific IFNAR-deficient mice.

Project description:We sequenced whole adipose tissue from control and LCMV infected mice 6dpi, in control vs T cell-specific IFNAR knockoutmice to understand the transcriptional changes in adipose tissue upon loss of type I IFN-T cell singaling axis, and how it contributes to cachexia.

2019-05-31 | GSE118819 | GEO

Gene expression analysis of murine peritoneal macrophages deficient for SAMHD1 and IFNAR

Project description:To investigate the contribution of type-1 IFN signalling to the upregulation of IFN- stimulated genes in SAMHD1-deficient cells, we performed global gene expression analysis of SAMHD1-deficient IFNAR-/- macrophages. Peritoneal macrophages from ten SAMHD1-deficient IFNAR-/- and six SAMHD1-deficient controls were FACS sorted. RNA was subjected to next generation mRNA sequencing.

2013-07-01 | E-GEOD-45358 | biostudies-arrayexpress

Adipose tissue myeloid cell RNAseq

Project description:Adipose tissue myeloid cell RNAseq

| PRJNA624121 | ENA

Gene expression analysis of murine peritoneal macrophages deficient for SAMHD1 and IFNAR

2013-07-01 | GSE45358 | GEO

Gene expression profile of gWAT SVF from adipose tissue-specific Pgam1 deficient mice

Project description:Epidydimal WAT from adipose tissue Pgam1 deficient mice shows the phenotype of beiging. We used single cell RNA sequencing (scRNA-seq) to characterize the beiging cells in gWAT.

2022-04-11 | GSE200374 | GEO

Analysis of transcriptional differences between ZIKV-infected Ifnar-/- and Ifnar+/- placentas

Project description:Purpose: While type I interferons (IFN) are important for control of viral replication, we see that, upon infection of Ifnar-/- females were crossed to Ifnar+/- males with ZIKV, only Ifnar+/- fetuses are resorbed or develop severe growth restriction. To identify how IFN may be altering placenta development, we performed RNAsequencing on infected and uninfected Ifnar-/- and Ifnar+/- placentas. Methods: Ifnar-/- females were crossed to Ifnar+/- males and infected intravaginally with Cambodian ZIKV at E5.5. Placentas were harvested from infected and uninfected pregnant dams at E10.5. Results/ Conclusions: Comparison of ZIKV-infected Ifnar-/- and Ifnar+/- shows an elevated interferon stimulated gene (ISG) signature in Ifnar+/- placentas but does not reveal any underlying developmental defects that may be causing defects in placenta development.

2017-12-31 | GSE98423 | GEO

RNAseq for subpopulations of adipose tissue stromal cells from mouse inguinal adipose tissue

Project description:RNAseq for subpopulations of adipose tissue stromal cells from mouse inguinal adipose tissue

| PRJEB41572 | ENA

Epigenetic activation of plasmacytoid DC drives IFNAR-dependent therapeutic differentiation of AML [RNAseq IFNAR KO tumor cells]

Project description:Epigenetic activation of plasmacytoid DC drives IFNAR-dependent therapeutic differentiation of AML [RNAseq IFNAR KO tumor cells]

| PRJNA813680 | ENA

Single nucleus RNAseq of mouse inguinal white adipose tissue with Rspo2 or GFP AAV injection

Project description:We injected AAV to overexpress Rspo2 or GFP in mice, performed single nucleus RNAseq for inguinal white adipose tissue (ingWAT).

2021-12-07 | E-MTAB-11104 | biostudies-arrayexpress

Expression profile of BAT and gWAT from adipose tissue-specific Pgam1 deficient mice

Project description:To analyze the gene expression profile of BAT and gWAT from Pgam1 depletion mice, we performed whole genome microarray expression profiling using brown adipose tissue (BAT) and gonadal white adipose tissue (gWAT) from adipose tissue-specific Pgam1 knockout (KO) mice.

2022-04-11 | GSE186030 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data