Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Streptomyces scabiei strain:SAI-025

ABSTRACT: Streptomyces scabiei SAI-025 genome sequencing

PROVIDER: PRJNA546627 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10151557_subreads.fastq.gz	Fastqsanger.gz
	SRR10151558_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Streptomyces scabiei strain:SAI-025

Project description:Streptomyces scabiei SAI-025 genome sequencing

| PRJNA546627 | ENA

The virulome of Streptomyces scabiei in response to cello-oligosaccharides elicitors

Project description:We provide a manually-curated genome mining analysis of the bacterial plant pathogen Streptomyces scabiei. The expression of the deduced biosynthetic gene clusters was assessed by a RNAseq approach, and their potential to be induced by the virulence elicitors cellobiose and cellotriose was estimated by comparing mRNA levels before and after elicitor addition. Finally, we performed metabolomic analyzes to evaluate how the production of known specialized metabolites responds to virulence elicitors, in correlation (or not) with the transcriptomic data

2021-08-08 | GSE181490 | GEO

Streptomyces scabiei 87.22

Project description:Streptomyces scabiei 87.22 genome sequencing

| PRJEA40749 | ENA

Streptomyces scabiei strain:ST129

Project description:Streptomyces scabiei strain:ST129 Genome sequencing and assembly

| PRJNA412879 | ENA

Streptomyces scabiei strain:LBUM848

Project description:Streptomyces scabiei strain:LBUM848 Genome sequencing and assembly

| PRJNA1030312 | ENA

Streptomyces sp. strain:SAI-229

Project description:Streptomyces sp. SAI-229 genome sequencing