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Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells [RNA-Seq]

ABSTRACT: Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells [RNA-Seq]

PROVIDER: PRJNA626595 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR11574514.fastq.gz	Fastqsanger.gz
	SRR11574515.fastq.gz	Fastqsanger.gz
	SRR11574516.fastq.gz	Fastqsanger.gz
	SRR11574517.fastq.gz	Fastqsanger.gz
	SRR11574518.fastq.gz	Fastqsanger.gz

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Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells [scRNA-Seq]

Project description:The homeostasis of the gut epithelium relies upon continuous renewal and proliferation of crypt-resident intestinal epithelial stem cells (IESCs). Wnt/β-catenin signaling is required for IESC maintenance, however, it remains unclear how this pathway selectively governs the identity and proliferative decisions of IESCs. Here, we demonstrate that C-terminally-recruited transcriptional co-factors of β-catenin act as all-or-nothing regulators of Wnt-target gene expression. Blocking their interactions with β-catenin rapidly induces loss of IESCs and intestinal homeostasis. Conversely, N-terminally recruited co-factors fine-tune β-catenin’s transcriptional output to ensure proper self-renewal and proliferative behaviour of IESCs. Impairment of N-terminal interactions triggers transient hyperproliferation of IESCs, resulting in exhaustion of the self-renewing stem cell pool. IESC mis-differentiation, accompanied by intrinsic and extrinsic stress signalling results in a process resembling aberrant "villisation" of intestinal crypts. Our data suggest that IESC-specific Wnt/β-catenin output requires discrete regulation of transcription by transcriptional co-factors.

2020-04-21 | GSE148942 | GEO

Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells [ATAC-Seq]

2020-04-21 | GSE148940 | GEO

Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells [RNA-Seq]

2020-04-21 | GSE148941 | GEO

Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells

Project description:Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells

| PRJNA626592 | ENA

Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells [ATAC-Seq]

Project description:Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells [ATAC-Seq]

| PRJNA626596 | ENA

Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells [scRNA-Seq]

Project description:Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells [scRNA-Seq]

| PRJNA626594 | ENA

Discrete regulation of β-catenin-mediated transcription governs identity of intestinal epithelial stem cells

Project description:This SuperSeries is composed of the SubSeries listed below.

2020-04-21 | GSE148943 | GEO

Gonadal Identity in the Absence of pro-Testis Factor SOX9 and pro-Ovary Factor beta-catenin

Project description:The main goal of our study is to identify the molecular events that determine the gonadal identity in mammals. Although testis and ovary arise from a common embryonic primordium, they represent outcomes of opposing fate determination. This decision to differentiate into a testis or an ovary hinges upon the balance between two antagonizing factors, pro-testis SOX9 and pro-ovary β-catenin. This microarray analysis led to the identification of the genes involved in the fate of XX and XY gonads in absence of SOX9 and beta-catenin We developed mouse genetic models that lack either Sox9, β-catenin, or both specifically in the somatic cells. All embryos used in this study resulted from the crossing between Ctnnb1f/f; Sox9f/f females with Sf1-cre+/Tg ; Ctnnb1+/f; Sox9+/f males. XX and XY fetal gonads were collected at embryonic day E14.5

2015-05-26 | E-GEOD-67463 | biostudies-arrayexpress

Detection of beta-catenin polymorphism and fluorescence quantitative PCR expression in human intestinal mucosal samples

Project description:Interventions: Case series:Nil Primary outcome(s): Ecadherin, beta catenin, CDX - 2, SOX - 2 Study Design: Non randomized control

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Gonadal Identity in the Absence of pro-Testis Factor SOX9 and pro-Ovary Factor beta-catenin

2015-05-26 | GSE67463 | GEO