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RNA-sequencing following Psi or Myc knockdown in Drosophila larval wing tissue

ABSTRACT: RNA-sequencing following Psi or Myc knockdown in Drosophila larval wing tissue

PROVIDER: PRJNA629805 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR11680566_1.fastq.gz	Fastqsanger.gz
	SRR11680566_2.fastq.gz	Fastqsanger.gz
	SRR11680567_1.fastq.gz	Fastqsanger.gz
	SRR11680567_2.fastq.gz	Fastqsanger.gz
	SRR11680568_1.fastq.gz	Fastqsanger.gz

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1 - 5 of 18

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RNA-sequencing following Psi or Myc knockdown in Drosophila larval wing tissue

Project description:RNA-seq analysis of gene expression changes following the depletion of P-element somatic inhibitor (Psi) or Myc via RNAi in wing discs of mid-third instar larvae, compared with control. Differential splicing analysis was also performed on the Psi RNAi dataset.

2020-06-30 | GSE149719 | GEO

Identification of genome-wide binding sites of Psi, Myc and Pol and gene expression following Psi or Myc knockdown in Drosophila larval wing tissue

Project description:Identification of genome-wide binding sites of Psi, Myc and Pol and gene expression following Psi or Myc knockdown in Drosophila larval wing tissue

| PRJNA629796 | ENA

Identification of genome-wide binding sites of Psi, Myc and Pol in Drosophila imaginal wing discs using Targeted DamID

Project description:Targeted DamID was performed to identify binding targets of P-element somatic inhinitor (Psi), Myc and RNA Polymerase (using the RpII18 subunit common to all 3 polymerases). Scalloped(sd)-GAL4 was used to restrict expression to the wing disc.

2020-06-30 | GSE149718 | GEO

Identification of genome-wide binding sites of Psi, Myc and Pol and gene expression following Psi or Myc knockdown in Drosophila larval wing tissue

Project description:This SuperSeries is composed of the SubSeries listed below.

2020-06-30 | GSE149721 | GEO

Transcriptome analysis of control (y w) and Paip1 mutant third instar larval wing imaginal discs

Project description:We report the genome-wide RNA profiling of third instar larval wing imaginal discs upon Paip1 mutation

2023-07-31 | GSE146531 | GEO

Identification of genome-wide binding sites of Psi, Myc and Pol in Drosophila imaginal wing discs using Targeted DamID

Project description:Identification of genome-wide binding sites of Psi, Myc and Pol in Drosophila imaginal wing discs using Targeted DamID

| PRJNA629803 | ENA

Brinker regulates wing disc growth in part via repression of Myc expression

Project description:The molecular mechanisms regulating tissue size represent an unsolved puzzle in developmental biology. One signaling pathway controlling growth of the Drosophila wing is Dpp. Dpp promotes growth via repression of the transcription factor Brinker. The transcriptional targets of Brinker that control cell growth and proliferation, however, are not yet fully elucidated. We report here a genome-wide ChIP-seq of endogenous Brinker from wing imaginal discs. We identify the growth regulator Myc as a target of Brinker and show that Myc together with the microRNA bantam explain a large fraction of the growth inhibition caused by Brinker. This work sheds light on the effector mechanisms by which Dpp signaling controls tissue growth. Identification of Brinker binding sites in Wing imaginal discs cells

2013-01-29 | E-GEOD-40957 | biostudies-arrayexpress

RNA-seq on Drosophila wing imaginal discs after Myc RNAi or overexpression

Project description:RNA-seq was performed to confirm the effect of dMyc overexpression or RNAi repression on conserved Myc targets in the Drosophila wing disc.

2022-04-26 | E-MTAB-9328 | biostudies-arrayexpress

Myc-dependent transcriptome of Drosophila L3 larval wing imaginal discs, and its dependency on Max and/or the PAF1 complex component Atu/Leo1

Project description:A 2-hour heat-shock at 37C was used to activate hs-FLP and an actin5C-FRT-stop-FRT-GAL4 transgene in larvae carrying any possible combination of the genetic elements UAS-Myc, UAS-Atu-IR, Max-/-. 48 hours later 16-27 wing imaginal discs were isolated from wandering L3 larvae and polyA-RNA was processed for sequencing.

2017-10-02 | E-MTAB-5470 | biostudies-arrayexpress

SmD3 protein interactome in Drosophila melanogaster wing imaginal discs

Project description:Screening for binding partners of the splicing factor SmD3 and changes in interaction upon depletion of the protein Ecdysoneless (Ecd) in the nubbin domain of third-instar larval wing imaginal discs.

2021-09-09 | PXD019761 | Pride

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