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Plasmopara viticola

ABSTRACT: Plasmopara viticola whole-genome resequencing for population genomics

PROVIDER: PRJNA644583 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR12603200_1.fastq.gz	Fastqsanger.gz
	SRR12603200_2.fastq.gz	Fastqsanger.gz
	SRR12603201_1.fastq.gz	Fastqsanger.gz
	SRR12603201_2.fastq.gz	Fastqsanger.gz
	SRR12603202_1.fastq.gz	Fastqsanger.gz

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Characterization of transcriptional reprogramming of Vitis vinifera during Trichoderma-induced resistance and in response to Plasmopara viticola using RNA-Seq

Project description:We have carried out a global transcriptional analysis of grapevine resistance induced by Trichoderma harzianum T39 against Plasmopara viticola using high-throughput Illumina sequencing technology. Four samples were analyzed: control (C), T39-treated (T39), P. viticola-inoculated control (C+P.v.) and P. viticola-inoculated T39-treated (T39 P.v.) plants. Three biological replicates (named A, B and C) were analyzed for each sample and sequenced twice (named 1 and 2). Reads were aligned to the Pinot Noir ENTAV 115 genome and then analyzed to measure gene expression levels. Differentially expressed genes have been identified by statistical analysis.

2012-06-27 | E-MTAB-4324 | biostudies-arrayexpress

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