Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Circular RNA expression analysis of orbital venous malformation

ABSTRACT: Circular RNA expression analysis of orbital venous malformation

PROVIDER: PRJNA666629 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12746502.fastq.gz	Fastqsanger.gz
	SRR12746503.fastq.gz	Fastqsanger.gz
	SRR12746504.fastq.gz	Fastqsanger.gz
	SRR12746505.fastq.gz	Fastqsanger.gz
	SRR12746506.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Circular RNA expression analysis of orbital venous malformation [RNA-Seq]

Project description:This research aimed to investigate the aberrant expression of circRNA, messenger RNA, and microRNA in orbital venous malformation. A competitive endogenous RNA network was constructed to elucidate their potential roles in orbital venous malformation.

2022-07-06 | GSE158791 | GEO

Circular RNA expression analysis of orbital venous malformation [miRNA-Seq]

2022-07-06 | GSE158793 | GEO

Circular RNA expression analysis of orbital venous malformation [miRNA-Seq]

Project description:Circular RNA expression analysis of orbital venous malformation [miRNA-Seq]

| PRJNA666750 | ENA

Circular RNA expression analysis of orbital venous malformation [RNA-Seq]

Project description:Circular RNA expression analysis of orbital venous malformation [RNA-Seq]

| PRJNA666558 | ENA

Circular RNA expression analysis of orbital venous malformation

Project description:This SuperSeries is composed of the SubSeries listed below.

2022-07-06 | GSE158798 | GEO

Expression data: Venous malformation-causative TIE2-mutations mediate an AKT-dependent decrease in PDGFB

Project description:Comparison of transcriptional profiles of human umbilical vein endothelial cells (HUVECs) expressing wild-type vs. VM-causative mutant forms of TIE2/TEK. The effects of the most common Venous Malformation-causative mutations in the endothelial cell tyrosine kinase receptor: R849W and L914F, were tested. 743 genes were differentially expressed across the four groups. The 80 genes distinguishing between L914F and wild-type TIE2-expressing HUVECs were analyzed in greater detail. 3 batches each of: non-transfected, and wild-type TIE2, R849W-TIE2, and L914F-TIE2 overexpressing HUVECs were compared by exon-array profiling.

2013-06-04 | E-GEOD-46684 | biostudies-arrayexpress

Expression data: Venous malformation-causative TIE2-mutations mediate an AKT-dependent decrease in PDGFB

2013-06-04 | GSE46684 | GEO

Transcriptomic profiling of human orbital fat and differentiating orbital fibroblasts

Project description:Bulk RNA-Seq and snRNA-Seq of human orbital aft

2024-06-24 | GSE174139 | GEO

IgG4-ROD and orbital MALT lymphoma

Project description:The molecular pathogenesis of orbital lymphoproliferative disorders, such as immunoglobulin G4-related ophthalmic disease (IgG4-ROD) and orbital mucosa-associated lymphoid tissue (MALT) lymphoma, remains essentially unknown. Differentiation between the two disorders, which is important since work-up and treatment can vary greatly, is often challenging due to the lack of specific biomarkers. Although miRNAs play an important role in the regulation of carcinogenesis and inflammation, the relationship between miRNA and orbital lymphoproliferative diseases remains unknown. A comprehensive analysis of 2,565 miRNAs was performed in biopsied specimens and serum of 17 cases with IgG4-ROD and 21 cases with orbital MALT lymphoma. We identified specific miRNA signatures, their miRNA target pathways, and network analysis associated with IgG4-ROD and orbital MALT lymphoma. Machine-learning analysis identified miR-202-3p and miR-7112-3p as the best discriminators of IgG4-ROD and orbital MALT lymphoma, respectively. In the tissue pathway, Longevity regulating pathway in IgG4-ROD and MAPK signaling pathway in orbital MALT lymphoma were most enriched by downregulated miRNAs. This is the first evidence of the miRNA profile in biopsied specimens and serum of patients with IgG4-ROD and orbital MALT lymphoma. These data will be useful for developing diagnostic and therapeutic interventions, as well as elucidating of these disorders.

2021-08-01 | GSE155177 | GEO

lncRNA and circular RNAs in orbital adipose/connective tissue from patients with thyroid-associated ophthalmopathy

Project description:Our study aimed to investigate the differentially expressed lncRNA and circRNAs and their potential roles in orbital adipose/connective tissue from patients with thyroid-associated ophthalmopathy (TAO).

2023-01-16 | GSE143789 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data