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Single-nuclei RNA sequencing analysis of myocardial infarction in WT and PDGFRb EC-specific KO mouse

ABSTRACT: Single-nuclei RNA sequencing analysis of myocardial infarction in WT and PDGFRb EC-specific KO mouse

PROVIDER: PRJNA795676 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR17500027.fastq.gz	Fastqsanger.gz
	SRR17500028.fastq.gz	Fastqsanger.gz
	SRR17500029.fastq.gz	Fastqsanger.gz
	SRR17500030.fastq.gz	Fastqsanger.gz

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Single-nuclei RNA sequencing analysis of myocardial infarction in WT and PDGFRb EC-specific KO mouse

Project description:To investigate the transcriptome change in myocardial infarction (MI)-associated cells, we prepared single nuclei derived from mouse injured infarcted heart tissues and performed RNA sequencing analysis. Considering that adult cardiomyocytes are limited for 10XGenomics scRNA-seq due to large size not compatible with microfluidic channels, we prepared nuclei from the tissues. Particularly, cardiac nuclei were harvested from PDGFRb fl/fl control or Cdh5-Cre; PDGFRb fl/fl KO mouse.

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