Proteomics

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Identification and relative quantitation of grape berry exocarp proteins using a parallel mass spectrometric method.


ABSTRACT: Identification and relative quantitation of grape berry exocarp proteins using a parallel mass spectrometric method.

INSTRUMENT(S): LTQ Orbitrap, instrument model

ORGANISM(S): Vitis Vinifera (grape)

SUBMITTER: Juan Casado-Vela  

PROVIDER: PRD000126 | Pride | 2011-04-15

REPOSITORIES: Pride

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iTRAQ-based profiling of grape berry exocarp proteins during ripening using a parallel mass spectrometric method.

Martínez-Esteso Maria José MJ   Casado-Vela Juan J   Sellés-Marchart Susana S   Elortza Felix F   Pedreño Maria Angeles MA   Bru-Martínez Roque R  

Molecular bioSystems 20101126 3


The 4-plex iTRAQ platform was utilized to analyze the protein profiles in four stages of grapevine berry skin ripening, from pre-veraison to fully ripening. Mass spectrometric data were acquired from three replicated analyses using a parallel acquisition method in an Orbitrap instrument by combining collision-induced dissociation (CID) and higher energy collision-induced dissociation (HCD) peptide ion fragmentations. As a result, the number of spectra suitable for peptide identification (either  ...[more]

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