Proteomics

Dataset Information

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Grape berry vacuole proteomic - Quantitative Proteome Analysis Reveals Changes in the Protein Landscape During Grape Berry Development With a Focus on Vacuolar Transport Proteins


ABSTRACT: The vacuole occupies a large portion of plant cell volume, it is especially true to fruit tissues. Berry flesh cell vacuole serves as storage organelle for water, sugars, acids, secondary metabolites and others, which largely determining berry quality (Fontes et al., 2011a, b; Shiratake and Martinoia, 2007, Conde et al., 2006). However, the molecular basis of these compartmentation processes is still poorly understood. As in many species, the major bottle neck to study these aspects in grapevine is to obtain highly purified vacuoles with a good yield (Fontes et al., 2010). Up to date, several vacuole or tonoplast proteome researches were applied on a few plants mainly on Arabidopsis thaliana, vacuoles or tonoplast were derived from mesophyll cells (Carter et al., 2004, Endler et al., 2006, Schulze, et al., 2012) or cell culture (Jaquinod et al 2006, Shimaoka et al 2004), cauliflower buds (Schmidt et al., 2007) and sugar beet taproots (Jung et al., 2015). Though the grape berry protoplasts and intact vacuoles were successfully isolated from Cabernet Sauvignon berry suspension-cultured cells (Fontes et al., 2010), the vacuoles isolated from grape berry or different development and ripening stages of grape berry mesocarp tissues were not achieved.

INSTRUMENT(S): Thermo Scientific instrument model, Thermo Fisher Scientific instrument model

ORGANISM(S): Vitis Vinifera (grape)

TISSUE(S): Berry, Vacuole

SUBMITTER: kuang liuqing  

LAB HEAD: Ma hui qin

PROVIDER: PXD010556 | Pride | 2019-11-12

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
MS20170930-G005-624-FIRST.raw Raw
MS20170930-G005-624-SECOND.raw Raw
MS20170930-G005-624-THIRD.raw Raw
MS20170930-G005-716-FIRST.raw Raw
MS20170930-G005-716-SECOND.raw Raw
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Publications

Quantitative Proteome Analysis Reveals Changes in the Protein Landscape During Grape Berry Development With a Focus on Vacuolar Transport Proteins.

Kuang Liuqing L   Chen Shangwu S   Guo Yan Y   Ma Huiqin H  

Frontiers in plant science 20190515


The vacuole plays a central role in fruit growth and quality formation, yet its proteomic landscape is largely unknown. In the present study, a protocol for isolating intact vacuoles from grape flesh tissue was successfully established. Quantitative proteome analysis identified 2533 proteins from five sampling dates along Cabernet Sauvignon berry development from stage I to III; among them, 1443 proteins were identified on all five sampling dates in at least two biological replicates per sample  ...[more]

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