Proteomics

Dataset Information

0

Glycosyltransferases from oat (Avena) implicated in the acylation of avenacins


ABSTRACT: To study glycosyltransferases from oat, root proteins were extracted and separated gy 1D SDS gel electrophoresis. Bands were cut out, digested with trypsin, and the resulting peptides were analysed by LCMSMS on an Orbitrap mass sepctrometer. Raw data was processed with MaxQuant 1.3.0.5, and database searches on a custom database performed using Mascot.

INSTRUMENT(S): LTQ Orbitrap

ORGANISM(S): Avena Strigosa (black Oat)

SUBMITTER: Gerhard Saalbach  

LAB HEAD: Gerhard Saalbach

PROVIDER: PXD000083 | Pride | 2013-04-24

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
081208_03.RAW Raw
081209_01.RAW Raw
PRIDE_Exp_Complete_Ac_27977.pride.mgf.gz Mgf
PRIDE_Exp_Complete_Ac_27977.pride.mztab.gz Mztab
PRIDE_Exp_Complete_Ac_27977.xml.gz Xml
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Publications


Plants produce a huge array of specialized metabolites that have important functions in defense against biotic and abiotic stresses. Many of these compounds are glycosylated by family 1 glycosyltransferases (GTs). Oats (Avena spp.) make root-derived antimicrobial triterpenes (avenacins) that provide protection against soil-borne diseases. The ability to synthesize avenacins has evolved since the divergence of oats from other cereals and grasses. The major avenacin, A-1, is acylated with N-methyl  ...[more]

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