Proteomics

Dataset Information

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Quantitative proteomics of soybean root during recovery after flooding

ABSTRACT: Soybean is one of the most economically important legume in the world, providing vegetable protein and oil for millions of people, ingredients for hundreds of nutritional products, but its production being threatened globally by increased flooding events. To unravel the mechanism involved in recovery after flooding in soybean, proteomic analysis was carried out.

INSTRUMENT(S): LTQ XL

ORGANISM(S): Glycine Max

TISSUE(S): Plant Cell, Root

DISEASE(S): Wounds And Injuries

SUBMITTER: Mudassar Khan  

LAB HEAD: Setsuko Komatsu

PROVIDER: PXD000986 | Pride | 2014-12-04

REPOSITORIES: Pride

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Dataset's files

Source:
Action DRS
1001.RAW Raw
1001.mgf Mgf
1001.msf Msf
1001.pep.xml Pepxml
1002.RAW Raw
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Publications

Quantitative proteomics reveals that peroxidases play key roles in post-flooding recovery in soybean roots.

Khan Mudassar Nawaz MN   Sakata Katsumi K   Hiraga Susumu S   Komatsu Setsuko S  

Journal of proteome research 20141016 12

Soybean is an important legume crop that exhibits markedly reduced growth and yields under flooding conditions. To unravel the mechanisms involved in recovery after flooding in soybean root, gel-free proteomic analysis was performed. Morphological analysis revealed that growth suppression was more severe with increased flooding duration. Out of a total of 1645 and 1707 identified proteins, 73 and 21 proteins were changed significantly during the recovery stage following 2 and 4 days flooding, re  ...[more]

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