Proteomics

Dataset Information

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Zea mays AM fungi interaction - A rice Serine/Threonine receptor-like kinase regulates arbuscular mycorrhizal symbiosis at the peri-arbuscular membrane


ABSTRACT: We describe a method that detects membrane proteins from cell type-specific plant plasma membrane subdomains. As the biochemical properties of membrane subdomains are often unknown, general membrane enrichment by continuous sucrose density gradient centrifugation was combined with filter-aided sample preparation, strong cation exchange pre-fractionation and sensitive LTQ Orbitrap Velos-based mass-spectrometry proteomics. This workflow identified plasma membrane proteins, including underrepresented proteins, at an unprecedented level of sensitivity and reproducibility.

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Zea Mays (maize)

TISSUE(S): Root

SUBMITTER: Marco Chiapello  

LAB HEAD: Uta Paszkowski

PROVIDER: PXD002575 | Pride | 2018-09-24

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
APM1_1.raw Raw
APM1_2.raw Raw
APM1_3.raw Raw
APM1_4.raw Raw
APM1_5.raw Raw
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Publications


In terrestrial ecosystems most plant species live in mutualistic symbioses with nutrient-delivering arbuscular mycorrhizal (AM) fungi. Establishment of AM symbioses includes transient, intracellular formation of fungal feeding structures, the arbuscules. A plant-derived peri-arbuscular membrane (PAM) surrounds the arbuscules, mediating reciprocal nutrient exchange. Signaling at the PAM must be well coordinated to achieve this dynamic cellular intimacy. Here, we identify the PAM-specific Arbuscul  ...[more]

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