Dataset Information
HEK293 Quality Control example dataset - contamination test
Ontology highlight
ABSTRACT:
INSTRUMENT(S): LTQ Orbitrap Velos
ORGANISM(S): Homo Sapiens (human)
TISSUE(S): Kidney
SUBMITTER: 
Chris Bielow
LAB HEAD: Stefan Kempa
PROVIDER: PXD003134 | Pride | 2015-11-04
REPOSITORIES: Pride
Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| 20101227_Velos1_TaGe_SA_HEK293_01.raw | Raw | |||
| 20101227_Velos1_TaGe_SA_HEK293_02.raw | Raw | |||
| QC_20140521_1.raw | Raw | |||
| QC_20140521_2.raw | Raw | |||
| crap_withMycoplasma.fasta | Fasta |
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Publications
Proteomics Quality Control: Quality Control Software for MaxQuant Results.
Journal of proteome research 20151228 3
Mass spectrometry-based proteomics coupled to liquid chromatography has matured into an automatized, high-throughput technology, producing data on the scale of multiple gigabytes per instrument per day. Consequently, an automated quality control (QC) and quality analysis (QA) capable of detecting measurement bias, verifying consistency, and avoiding propagation of error is paramount for instrument operators and scientists in charge of downstream analysis. We have developed an R-based QC pipeline ...[more]
