Proteomics

Dataset Information

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Differential proteomics of human seminal fluid Normo Vs Astehnozoospermia


ABSTRACT: Scarcely understood defects lead to asthenozoospermia which results in poor fertility outcomes. Incomplete knowledge of these defects hinders the development of new therapies and reliance on interventional therapies, such as in vitro fertilization, increases. Sperm cells, being transcriptionally and translationally silent, necessitate the proteomic approach to study the sperm funnction. We have performed a differential proteomics analysis of human sperm and seminal fluid and identified over 1,700 proteins. We have included 667 proteins in sperm and 430 proteins in seminal plasma dataset for further analysis. Statistical and mathematical analysis combined with pathway analysis and self organizing maps clustering and correlation was performed on the dataset. It was found that sperm proteomic signature combined with statistical analysis as opposed to the seminal plasma proteomic signature can differentiate the normozoospermic versus the asthenozoospermic sperm samples.

INSTRUMENT(S): Synapt MS

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Semen, Sperm

SUBMITTER: Sakari Joenväärä  

LAB HEAD: Risto Renkonen

PROVIDER: PXD004098 | Pride | 2016-12-13

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20151028_SEMEN_PROTEOMICS_01a.mzML Mzml
20151028_SEMEN_PROTEOMICS_01b.mzML Mzml
20151028_SEMEN_PROTEOMICS_01c.mzML Mzml
20151028_SEMEN_PROTEOMICS_02a.mzML Mzml
20151028_SEMEN_PROTEOMICS_02b.mzML Mzml
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Publications

Human Spermatozoa Quantitative Proteomic Signature Classifies Normo- and Asthenozoospermia.

Saraswat Mayank M   Joenväärä Sakari S   Jain Tushar T   Tomar Anil Kumar AK   Sinha Ashima A   Singh Sarman S   Yadav Savita S   Renkonen Risto R  

Molecular & cellular proteomics : MCP 20161128 1


Scarcely understood defects lead to asthenozoospermia, which results in poor fertility outcomes. Incomplete knowledge of these defects hinders the development of new therapies and reliance on interventional therapies, such as in vitro fertilization, increases. Sperm cells, being transcriptionally and translationally silent, necessitate the proteomic approach to study the sperm function. We have performed a differential proteomics analysis of human sperm and seminal plasma and identified and quan  ...[more]

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