Proteomics

Dataset Information

0

Geoduck (Panopea generosa) gonad LC-MS/MS DIA

ABSTRACT: Geoduck clams (Panopea generosa) were collected from Puget Sound, WA in November, 2014. Male and female geoduck gonads were sampled at three reproductive stages over the course of three months: early, middle, and late. Early stage indicates that the gonad cells are just beginning to differentiate and late stage indicates that the geoduck are ready to spawn. The goal of this study was to identify biomarkers of the geoduck reproductive cycle. Due to the restriction of our current data model we can not add multiple names as Lab Head. However, this Project has been equally led by Steven B. Roberts and Brook L. Nunn.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Panopea Generosa

TISSUE(S): Testis, Egg, Oocyte

SUBMITTER: Emma Timmins-Schiffman  

LAB HEAD: Steven B. Roberts

PROVIDER: PXD004921 | Pride | 2017-01-02

REPOSITORIES: Pride

Json Xml

Dataset's files

Source:
Action DRS
2015_December_30_DIA_geoduck.raw Raw
2015_December_30_DIA_geoduck11.raw Raw
2015_December_30_DIA_geoduck12.raw Raw
2015_December_30_DIA_geoduck15.raw Raw
2015_December_30_DIA_geoduck16.raw Raw
Items per page:
1 - 5 of 20
altmetric image

Publications

Integrating Discovery-driven Proteomics and Selected Reaction Monitoring To Develop a Noninvasive Assay for Geoduck Reproductive Maturation.

Timmins-Schiffman Emma B EB   Crandall Grace A GA   Vadopalas Brent B   Riffle Michael E ME   Nunn Brook L BL   Roberts Steven B SB  

Journal of proteome research 20170811 9

Geoduck clams (Panopea generosa) are an increasingly important fishery and aquaculture product along the eastern Pacific coast from Baja California, Mexico, to Alaska. These long-lived clams are highly fecund, although sustainable hatchery production of genetically diverse larvae is hindered by the lack of sexual dimorphism, resulting in asynchronous spawning of broodstock, unequal sex ratios, and low numbers of breeders. The development of assays of gonad physiology could indicate sex and matur  ...[more]

Similar Datasets

Proteomics Detection of Low Abundance Ocean Bacterial Peptides DIA
2017-02-02 | PXD004758 | Pride
Proteomics PROTEOMIC RESPONSE OF EARLY JUVENILE PACIFIC OYSTERS TO TEMPERATURE
2022-03-03 | PXD015434 | Pride
Proteomics Vagus Nerve Stimulation enhances remyelination and decreases innate neuroinflammation in a Multiple Sclerosis rodent model.
2024-05-10 | PXD050858 | Pride
Proteomics Quantitative proteome and phosphoproteome datasets of DNA replication and mitosis in Saccharomyces cerevisiae
2022-09-02 | PXD035896 | Pride
Transcriptomics Germination of Leafy Spurge (Euphorbia esula) Seeds under Constant and Alternating Temperature
2010-06-01 | E-GEOD-18533 | biostudies-arrayexpress
Proteomics The Triticale Mature Pollen and Stigma Proteomes – Assembling the Proteins for a Productive Encounter
2023-03-08 | PXD038905 | Pride
Proteomics The Brassica Mature Pollen and Stigma Proteomes: Preparing to Meet
2021-03-13 | PXD017953 | Pride
Proteomics A Comparative Proteomic Analysis of Whey Protein from Early, Mid and Late Lactation Stages of Indian Indigenous Breed, MalnadGidda (Bosindicus)
2018-02-16 | PXD007655 | Pride
Transcriptomics Expression data from young and adult mice after over expression of self MHC class l protein in skeletal muscle.
2009-06-02 | E-GEOD-14997 | biostudies-arrayexpress
Proteomics Pacific oyster phagosome LC-MSMS
2020-04-27 | PXD015810 | Pride