Proteomics

Dataset Information

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Proteome of Hypoxic Glioblastoma Cells


ABSTRACT: Tumors are known for hypoxic microenvironment due to decreased hemoglobin oxygen saturation arising from high acidity in tumor tissue, high consumption rates of rapidly proliferating cells, and irregular or even short-time cessation of blood flow in deformed vessels. Consequently, hypoxia promotes tumor to be highly malignant, metastatic, and resistant to therapy. In order to better understand the mechanisms of the correlation between hypoxia and cancer progression, we have studied the proteome of glioblastoma cells grown for five successive days under 1% oxygen via an innovative strategy, which involves quantification of newly synthesized proteins from cells previously labeled with heavy stable-isotope arginine and real-time accurate assessment of cell replication through the arginine light/heavy ratio in histone peptides. We found that hypoxia affects cancer cells in three sequential stages in vitro: the early inflammatory response stage with highly over-expressed glucose transporter protein GLUT1 and inflammation marker MKP2; the pre-EMT stage with over-expression of literally all enzymes in the glycolysis pathway towards pyruvate, as well as vitamin B12 transporter protein TCN2 which is essential for one-carbon metabolism; and the last EMT stage with distinct morphologic changes and protein expression profiles. Expression of methylation enzymes and the cellular production of their cofactors are either revealed or predicted to be significantly influenced by hypoxia, which demonstrates the importance of a follow-up study on epigenetic reprogramming in hypoxic cells.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Permanent Cell Line Cell, Cell Culture

DISEASE(S): Brain Glioblastoma Multiforme

SUBMITTER: Kangling Zhang  

LAB HEAD: Kangling Zhang

PROVIDER: PXD005487 | Pride | 2017-09-12

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
U87_Hypoxia_Exp1.msf Msf
U87_Hypoxia_Exp1.zip Other
U87_Hypoxia_Exp2.msf Msf
U87_Hypoxia_Exp2.zip Other
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Publications

Proteome Analysis of Hypoxic Glioblastoma Cells Reveals Sequential Metabolic Adaptation of One-Carbon Metabolic Pathways.

Zhang Kangling K   Xu Pei P   Sowers James L JL   Machuca Daniel F DF   Mirfattah Barsam B   Herring Jason J   Tang Hui H   Chen Yan Y   Tian Bing B   Brasier Allan R AR   Sowers Lawrence C LC  

Molecular & cellular proteomics : MCP 20170905 11


Rapidly proliferating tumors are exposed to a hypoxic microenvironment because of their density, high metabolic consumption, and interruptions in blood flow because of immature angiogenesis. Cellular responses to hypoxia promote highly malignant and metastatic behavior, as well as a chemotherapy-resistant state. To better understand the complex relationships between hypoxic adaptations and cancer progression, we studied the dynamic proteome responses of glioblastoma cells exposed to hypoxia via  ...[more]

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