Proteomics

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Maize root LC-MSMS, part 2 - Comparative proteomics of contrasting maize genotypes provides insights into salt-stress tolerance mechanisms


ABSTRACT: Salt stress is one major abiotic stress limiting maize grain yield throughout the world.To better understand maize salt tolerance molecular mechanism, comparative proteomic analysis was conducted on seedling roots of salt-tolerant genotype Jing724 and salt-sensitive genotype D9H under NaCl. Jing724 exhibited significantly higher germination rate and growth parameters (weight/length) than did D9H under salt treatment.We identified 565 differentially regulated proteins (DRP) using iTRAQ and 89 were specific to Jing724 while 424 were specific to D9H. In salt stressed Jing724, pentose phosphate pathway, glutathione metabolism and nitrogen metabolism were enriched. By pathway enrichment and protein-protein interaction analyses, key DRPs such as glucose-6-phosphate 1-dehydrogenase, NADPH producing dehydrogenase, glutamate synthase and glutamine synthasewere identified.Additionally, salt responsive proteins of Jing724 were indicated to facilitate energy management, maintenance of redox homeostasis, reducing ammonia toxicity, osmotic homeostasis regulation, stress defense, stress adaptation, biotic cross-tolerance and gene transcription regulation. Quantification of multiple metabolic or enzymatic changes including SOD activity, MDA content, relative electrolyte leakage and Proline content were consistent with their predicted changes based on functions of DRPs. DRP analysis was correlated with the mRNA transcripts abundancevariation of eight representative DRPs. These results contribute to elucidating molecular networks of salt tolerance.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Zea Mays (maize)

TISSUE(S): Root

SUBMITTER: Meijie Luo  

LAB HEAD: Jiuran Zhao

PROVIDER: PXD007802 | Pride | 2017-12-05

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
All_merged_sub_2.dat Other
All_merged_sub_3.dat Other
Zm-Root_2-1.mzML Mzml
Zm-Root_2-10.mzML Mzml
Zm-Root_2-11.mzML Mzml
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Publications

Comparative Proteomics of Contrasting Maize Genotypes Provides Insights into Salt-Stress Tolerance Mechanisms.

Luo Meijie M   Zhao Yanxin Y   Wang Yuandong Y   Shi Zi Z   Zhang Panpan P   Zhang Yunxia Y   Song Wei W   Zhao Jiuran J  

Journal of proteome research 20171213 1


Salt stress is a major abiotic factor limiting maize yield. To characterize the mechanism underlying maize salt tolerance, we compared the seedling root proteomes of salt-tolerant Jing724 and salt-sensitive D9H. The germination rate and growth parameter values (weight and length) were higher for Jing724 than for D9H under saline conditions. Using an iTRAQ-based method, we identified 513 differentially regulated proteins (DRPs), with 83 and 386 DRPs specific to Jing724 and D9H, respectively. In s  ...[more]

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