Proteomics

Dataset Information

0

The farmed Atlantic salmon (Salmo salar) skin-mucus proteome

ABSTRACT: Norway is the largest producer and exporter of farmed Atlantic salmon (Salmo salar) worldwide. Skin disorders correlated with bacterial infections represent an important challenge for fish farmers due to the economic losses caused. Little is known about this topic, thus studying the skin-mucus of Salmo salar and its bacterial community depict a step forward in understanding fish welfare in aquaculture. In this study, we used label free quantitative mass spectrometry to investigate the skin-mucus proteins associated with both Atlantic salmon and bacteria. In addition, the microbial temporal proteome dynamics during 9 days of mucus incubation with sterilized seawater was investigated, in order to evaluate their capacity to utilize mucus components for growth in this environment.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Salmo Salar (atlantic Salmon)

TISSUE(S): Skin

SUBMITTER: Magnus Arntzen  

LAB HEAD: Gustav Vaaje-Kolstad

PROVIDER: PXD008838 | Pride | 2019-07-15

REPOSITORIES: Pride

Json Xml

Dataset's files

Source:
Action DRS
170216_Fs211.raw Raw
170216_Fs212.raw Raw
170216_Fs213.raw Raw
170216_Fs214.raw Raw
170216_Fs215.raw Raw
Items per page:
1 - 5 of 180
altmetric image

Publications

The Farmed Atlantic Salmon (<i>Salmo salar</i>) Skin-Mucus Proteome and Its Nutrient Potential for the Resident Bacterial Community.

Minniti Giusi G   Rød Sandve Simen S   Padra János Tamás JT   Heldal Hagen Live L   Lindén Sara S   Pope Phillip B PB   Ø Arntzen Magnus M   Vaaje-Kolstad Gustav G  

Genes 20190707 7

Norway is the largest producer and exporter of farmed Atlantic salmon (<i>Salmo salar</i>) worldwide. Skin disorders correlated with bacterial infections represent an important challenge for fish farmers due to the economic losses caused. Little is known about this topic, thus studying the skin-mucus of <i>Salmo salar</i> and its bacterial community depict a step forward in understanding fish welfare in aquaculture. In this study, we used label free quantitative mass spectrometry to investigate  ...[more]

Similar Datasets

Transcriptomics Transcriptomic profiling of the adaptive and innate immune responses of Atlantic salmon to Renibacterium salmoninarum infection
2020-09-24 | GSE150335 | GEO
Transcriptomics Mapping the cellular landscape of Atlantic salmon head kidney by single cell and single nucleus transcriptomics
2024-01-12 | GSE253087 | GEO
Transcriptomics Comparative transcriptomics of Atlantic Salmo salar, chum Onchorhynchus keta and pink salmon O. gorbuscha responding to salmon lice Lepeophtheirus salmonis infections
2014-02-24 | GSE48337 | GEO
Transcriptomics Transcriptional changes in Atlantic salmon (Salmo salar) after embryonic exposure to road salt (NaCl)
2015-08-05 | GSE71714 | GEO
Transcriptomics Transcriptional changes in Atlantic salmon (Salmo salar) after embryonic exposure to road salt (NaCl)
2015-08-05 | E-GEOD-71714 | biostudies-arrayexpress
Transcriptomics Profiling the transcriptome response of Atlantic salmon to formalin-killed Renibacterium salmoninarum
2020-07-21 | GSE135168 | GEO
Transcriptomics De Novo assembly and transcriptome analysis of Atlantic salmon macrophage/dendritic-like TO cells following type I IFN treatment and Salmonid alphavirus subtype-3 infection
2014-12-31 | GSE64095 | GEO
Transcriptomics A bioactive extract rich in triterpenic acid and polyphenols from Olea europaea promotes systemic immunity and protects Atlantic salmon smolts against furunculosis
2021-12-08 | GSE179142 | GEO
Transcriptomics Phytogenics from sage and lemon verbena promote growth, systemic immunity and disease resistance in Atlantic salmon (Salmo salar)
2024-09-20 | GSE184485 | GEO
Transcriptomics Transcriptional response of Atlantic salmon (Salmo salar) after primary versus secondary exposure to Infectious Salmon Anemia Virus (ISAV)
2011-05-23 | GSE28357 | GEO