Proteomics

Dataset Information

0

Defining the cellular proteolytic landscape


ABSTRACT: Mass spectrometry analysis of cellular targets of protein degradation

INSTRUMENT(S): Q Exactive

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Epithelial Cell, Cell Culture

SUBMITTER: Assaf Kacen  

LAB HEAD: Yifat Merbl

PROVIDER: PXD009092 | Pride | 2018-10-16

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
QEP2_YMER_184_1_170516.raw Raw
QEP2_YMER_185_1_170516.raw Raw
QEP2_YMER_186_1_170516.raw Raw
QEP2_YMER_187_1_170516.raw Raw
QEP2_YMER_188_1_170516.raw Raw
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Publications


Cellular function is critically regulated through degradation of substrates by the proteasome. To enable direct analysis of naturally cleaved proteasomal peptides under physiological conditions, we developed mass spectrometry analysis of proteolytic peptides (MAPP), a method for proteasomal footprinting that allows for capture, isolation and analysis of proteasome-cleaved peptides. Application of MAPP to cancer cell lines as well as primary immune cells revealed dynamic modulation of the cellula  ...[more]

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