Dataset Information

ITRAQ-based proteomics analysis（posterior silk gland）

ABSTRACT: We collected a total of 9.8 million mass spectra data generated in the laboratory from the proteomics analyses of different silkworm tissues.

INSTRUMENT(S): LTQ Orbitrap

ORGANISM(S): Bombyx Mori (silk Moth)

TISSUE(S): Posterior Silk Gland

SUBMITTER: Boxiong Zhong

LAB HEAD: Boxiong Zhong

PROVIDER: PXD010096 | Pride | 2019-07-01

REPOSITORIES: Pride

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Dataset's files

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			Action	DRS
	dat.tar.gz	Other
	iTRAQ-basedproteomicsanalysis.domesticsilkwormposteriorsilkgland.raw.rar	Raw

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Publications

Improving Silkworm Genome Annotation Using a Proteogenomics Approach.

Ye Xiaogang X Tang Xiaoli X Wang Xiaoxiao X Che Jiaqian J Wu Meiyu M Liang Jianshe J Ye Lupeng L Qian Qiujie Q Li Jianying J You Zhengying Z Zhang Yuyu Y Wang Shaohua S Zhong Boxiong B

Journal of proteome research 20190702 8

The silkworm genome has been deeply sequenced and assembled, but accurate genome annotation, which is important for modern biological research, remains far from complete. To improve silkworm genome annotation, we carried out a proteogenomics analysis using 9.8 million mass spectra collected from different tissues and developmental stages of the silkworm. The results confirmed the translational products of 4307 existing gene models and identified 1701 novel genome search-specific peptides (GSSPs) ...[more]

PMID: 31250652

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