Ontology highlight
ABSTRACT:
INSTRUMENT(S): TripleTOF 5600
ORGANISM(S): Danio Rerio (zebrafish) (brachydanio Rerio)
TISSUE(S): Eye, Spleen, Heart, Testis, Ovary, Brain, Intestine, Liver, Muscle
SUBMITTER: Peter Blattmann
LAB HEAD: Ruedi Aebersold
PROVIDER: PXD010876 | Pride | 2018-12-18
REPOSITORIES: Pride
Action | DRS | |||
---|---|---|---|---|
Zebrafish_Ensembl91_longesttrx.fasta | Fasta | |||
Zebrafish_consensus_library.sptxt | Other | |||
Zebrafish_s64_osw_decoy.TraML | Other | |||
iprophet.pep.xml | Pepxml | |||
sample_annotation_spectral_library.txt | Txt |
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Blattmann Peter P Stutz Vivienne V Lizzo Giulia G Richard Joy J Gut Philipp P Aebersold Ruedi R
Scientific data 20190212
Sequential window acquisition of all theoretical mass spectra (SWATH-MS) requires a spectral library to extract quantitative measurements from the mass spectrometry data acquired in data-independent acquisition mode (DIA). Large combined spectral libraries containing SWATH assays have been generated for humans and several other organisms, but so far no publicly available library exists for measuring the proteome of zebrafish, a rapidly emerging model system in biomedical research. Here, we prese ...[more]