Proteomics

Dataset Information

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FluAV vRNP interactome - A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape


ABSTRACT: Interferon-stimulated genes (ISGs) form the backbone of innate immune system and are pivotal for limiting intra- and intercellular viral replication and spread. We conducted a mass spectrometry–based survey to understand the fundamental organization of the innate immune system and to explore molecular functions of individual ISGs. We identified interactions between 104 ISGs and 1,401 cellular binding partners engaging in 2,734 high-confidence interactions. 90% of these interactions are unreported so far, and our survey therefore illuminates a far wider activity spectrum of ISGs than currently known. Integration of the resulting ISG-interaction network with published datasets and functional studies allowed us to identify novel regulators of immunity and immune system–related processes. Given the extraordinary robustness of the innate immune system, this ISG network may serve as a blueprint for therapeutic targeting of cellular systems in order to efficiently fight viral infections.

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Hela Cell

SUBMITTER: Pietro Scaturro  

LAB HEAD: Andreas Pichlmair

PROVIDER: PXD012275 | Pride | 2019-03-01

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
20130121_Orbi6_PhHu_Matching_1.raw Raw
20130129_Orbi6_PhHu_Matching_9.raw Raw
20130515_Orbi6_PhHu_Matching_8.raw Raw
20130627_Orbi6_PhHu_Matching_7.raw Raw
20130703_Orbi6_PhHu_Matching_6.raw Raw
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Publications


Interferon-stimulated genes (ISGs) form the backbone of the innate immune system and are important for limiting intra- and intercellular viral replication and spread. We conducted a mass-spectrometry-based survey to understand the fundamental organization of the innate immune system and to explore the molecular functions of individual ISGs. We identified interactions between 104 ISGs and 1,401 cellular binding partners engaging in 2,734 high-confidence interactions. 90% of these interactions are  ...[more]

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