Proteomics

Dataset Information

0

Nicotiana benthamiana cell pH mitigation


ABSTRACT: We assessed the off-target effects of M2 expression on the leaf proteome of Nicotiana benthamiana infiltrated with the bacterial gene vector Agrobacterium tumefaciens. A iTRAQ quantitative proteomics procedure was followed to compare the leaf proteomes of plants agroinfiltrated with either an ‘empty’ vector or an M2-encoding vector. Leaves infiltrated with the empty vector had a low soluble protein content compared to non-infiltrated control leaves, associated with increased levels of stress-related proteins but decreased levels of photosynthesis-associated proteins. M2 expression partly compromised these effects of agroinfiltration to restore soluble protein content in leaf tissue, associated with restored levels of photosynthesis-associated proteins and reduced levels of stress-related proteins in the apoplast. These data illustrate the cell-wide influence of Golgi lumen pH homeostasis on the leaf proteome of N. benthamiana responding to microbial challenge.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Nicotiana Benthamiana

TISSUE(S): Leaf

SUBMITTER: Philippe Jutras  

LAB HEAD: Dominique Michaud

PROVIDER: PXD014316 | Pride | 2019-12-06

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
iTRAQ_Nbenthamiana_Solanaceae.sf3 Other
iTRAQ_Nbenthamiana_Solanaceae_Results.xls Xls
iTRAQ_Nbenthamiana_Solanaceae_peptides.xls Xls
Items per page:
1 - 3 of 3
altmetric image

Publications

pH Gradient Mitigation in the Leaf Cell Secretory Pathway Attenuates the Defense Response of <i>Nicotiana benthamiana</i> to Agroinfiltration.

Jutras Philippe V PV   Sainsbury Frank F   Goulet Marie-Claire MC   Lavoie Pierre-Olivier PO   Tardif Rachel R   Hamel Louis-Philippe LP   D'Aoust Marc-André MA   Michaud Dominique D  

Journal of proteome research 20191212 1


Partial neutralization of the Golgi lumen pH by the ectopic expression of influenza virus M2 proton channel is useful to stabilize acid-labile recombinant proteins in plant cells, but the impact of pH gradient mitigation on host cellular functions has not been investigated. Here, we assessed the unintended effects of M2 expression on the leaf proteome of <i>Nicotiana benthamiana</i> infiltrated with the bacterial gene vector <i>Agrobacterium tumefaciens</i>. An isobaric tags for relative and abs  ...[more]

Similar Datasets

2022-01-29 | GSE195646 | GEO
2007-09-01 | E-GEOD-8259 | biostudies-arrayexpress
2009-11-01 | GSE15599 | GEO
2017-01-07 | GSE93247 | GEO
2017-01-07 | GSE93246 | GEO
2024-05-30 | GSE267686 | GEO
2007-09-01 | GSE8259 | GEO
2021-09-01 | GSE169282 | GEO
2009-12-27 | E-GEOD-14647 | biostudies-arrayexpress
2010-12-31 | E-TABM-989 | biostudies-arrayexpress