Proteomics

Dataset Information

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Deciphering the protein secretome of leukocyte-platelet rich fibrin


ABSTRACT: Leukocyte-platelet rich fibrin (L-PRF) is extensively used in the dentistry field and other clinical scenarios due to its regeneration properties. We obtained L-PRF membranes in absence of anticoagulants and cultured in DMEM. The secretomewas collected at days 3, 7 and 21 in order to identify the proteins secreted and the differences over time. Protein secretomeat day 3 was analysed by LC-MS/MS and differences in the proteome were analysed by Sequential Window Acquisition of all Theoretical Mass Spectra (SWATH). Overall, 705 proteins were identified in the secretome of L-PRF membranes after 3 days of culture, including growth factors (EGF, PDGFA) and proteins related to platelet and neutrophil degranulation. A total of 202 differentially secreted proteins were quantified by SWATH when comparing secretomes at days 3, 7 and 21. The majority of them were enriched at day 3 such as MMP9, TSP1 and CO3. On the contrary, fibrinogen and CATS were found down-regulated at day 3. Growth factor and western blotting analysis corroborated the proteomic results. This is the most detailed proteome analysis of the L-PRF secretome to date. Proteins and growth factors identified, and their kinetics, provide novel information to further understand the wound healing properties of L-PRF.

INSTRUMENT(S): TripleTOF 6600

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Blood Platelet, Blood Cell, Blood

SUBMITTER: Susana Bravo  

LAB HEAD: Susana B Bravo Lopez

PROVIDER: PXD017963 | Pride | 2021-09-09

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
LIBRERIAPOOLESd3d7Yd21__FDR.xlsx Xlsx
POOLD21_1.wiff Wiff
POOLD21_2.wiff Wiff
POOLD21_3.wiff Wiff
POOLD3_1.wiff Wiff
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Publications

Deciphering the secretome of leukocyte-platelet rich fibrin: towards a better understanding of its wound healing properties.

Hermida-Nogueira Lidia L   Barrachina María N MN   Morán Luis A LA   Bravo Susana S   Diz Pedro P   García Ángel Á   Blanco Juan J  

Scientific reports 20200903 1


Leukocyte-platelet rich fibrin (L-PRF) is extensively used in the dentistry field and other clinical scenarios due to its regeneration properties. The goal of the present study was to depict the L-PRF secretome and how it changes over time. We obtained L-PRF membranes and cultured them in DMEM. The secretome was collected at days 3, 7 and 21. The secretome at day 3 was analysed by LC-MS/MS and differences over time were analysed by Sequential Window Acquisition of all Theoretical Mass Spectra (S  ...[more]

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