Proteomics

Dataset Information

0

Viral hijacking of the TENT4-ZCCHC14 complex protects viral RNAs via mixed tailing


ABSTRACT: TENT4 enzymes generate “mixed tails” on mRNAs by adding adenosines with intermittent non-adenosine residues, which protect mRNAs from deadenylation. Here we discover the extensive mixed tailing in the transcripts of two distinct DNA viruses, hepatitis B virus (HBV) and human cytomegalovirus (HCMV), and their striking similarity in the mechanism to exploit the TENT4-ZCCHC14 complex. TAIL-seq analyses of HBV and HCMV RNAs revealed that TENT4A and TENT4B are responsible for the mixed tailing and protection of viral poly(A) tails. By fCLIP-seq on HBV-producing cells, we found that the HBV posttranscriptional regulatory element (PRE) is the primary site of the TENT4 interactome. A hairpin with a CNGGN-type pentaloop in the PRE is critical for TENT4-dependent regulation. Unexpectedly, HCMV also utilizes a similar pentaloop hairpin, an interesting example of convergent evolution. We further found that the CNGGN pentaloop is recognized by the SAM domain-containing ZCCHC14 protein which in turn recruits TENT4 to stabilize viral transcripts. Altogether, our study reveals the action mechanism of PRE that has been widely used to enhance gene expression, and introduces the TENT4-ZCCHC14 complex as the key host factor and a potential target for antiviral therapeutics.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Epithelial Cell, Cell Culture

SUBMITTER: Young-suk Lee  

LAB HEAD: V. Narry Kim

PROVIDER: PXD018061 | Pride | 2020-04-27

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
Beads_pullDown_Rep1.mzXML Mzxml
Beads_pullDown_Rep1.mzid.gz Mzid
Beads_pullDown_Rep1.pride.mgf.gz Mgf
Beads_pullDown_Rep1.pride.mztab.gz Mztab
Beads_pullDown_Rep1.raw Raw
Items per page:
1 - 5 of 34
altmetric image

Publications

Viral hijacking of the TENT4-ZCCHC14 complex protects viral RNAs via mixed tailing.

Kim Dongwan D   Lee Young-Suk YS   Jung Soo-Jin SJ   Yeo Jinah J   Seo Jenny J JJ   Lee Young-Yoon YY   Lim Jaechul J   Chang Hyeshik H   Song Jaewon J   Yang Jihye J   Kim Jong-Seo JS   Jung Guhung G   Ahn Kwangseok K   Kim V Narry VN  

Nature structural & molecular biology 20200525 6


TENT4 enzymes generate 'mixed tails' of diverse nucleotides at 3' ends of RNAs via nontemplated nucleotide addition to protect messenger RNAs from deadenylation. Here we discover extensive mixed tailing in transcripts of hepatitis B virus (HBV) and human cytomegalovirus (HCMV), generated via a similar mechanism exploiting the TENT4-ZCCHC14 complex. TAIL-seq on HBV and HCMV RNAs revealed that TENT4A and TENT4B are responsible for mixed tailing and protection of viral poly(A) tails. We find that t  ...[more]

Similar Datasets

2020-03-09 | GSE146600 | GEO
2020-03-09 | GSE146597 | GEO
2019-01-01 | GSE114486 | GEO
2021-04-30 | GSE173609 | GEO
2024-10-17 | PXD047110 | Pride
2024-05-20 | GSE250108 | GEO
2024-05-20 | GSE250105 | GEO
2024-05-20 | GSE250107 | GEO
2024-05-20 | GSE250106 | GEO
2024-05-20 | GSE261877 | GEO