Proteomics

Dataset Information

0

Colorectal cancer proteome project for biomarke search and development of clinical test

ABSTRACT: To find differentially expressed protein in colorectal cancer compared with normal colon tissue, we performed global proteome analysis using LC-MS.

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Epithelial Cell, Colon

DISEASE(S): Colon Cancer

SUBMITTER: Atsushi Tanaka  

LAB HEAD: Michael H. A. Roehrl

PROVIDER: PXD019103 | Pride | 2020-09-30

REPOSITORIES: Pride

Json Xml

Dataset's files

Source:
Action DRS
1450AT_S1_12R1_CRC30T_i39_MichaelRoehrl.raw Raw
1450AT_S1_13R1_CRC30N_i39_MichaelRoehrl.raw Raw
1450AT_S1_14R1_CRC31T_i39_MichaelRoehrl.raw Raw
1450AT_S1_15R1_CRC31N_i39_MichaelRoehrl.raw Raw
1450AT_S1_16R1_CRC32T_i39_MichaelRoehrl.raw Raw
Items per page:
1 - 5 of 31
altmetric image

Publications

Maspin as a Prognostic Marker for Early Stage Colorectal Cancer With Microsatellite Instability.

Tanaka Atsushi A   Wang Julia Y JY   Shia Jinru J   Zhou Yihua Y   Ogawa Makiko M   Hendrickson Ronald C RC   Klimstra David S DS   Roehrl Michael H A MHA  

Frontiers in oncology 20200610

Colorectal cancers are among the most common cancers and a leading cause of cancer death. In our pursuit to discover molecular markers for better characterization and precision theranostics of these cancers, we first conducted global deep proteome analyses and identified maspin (serpin B5, peptidase inhibitor 5) as an upregulated protein in tumor tissue. We then validated its expression in a large cohort of 743 patients with colorectal cancers of all stages and found that both cytoplasmic and nu  ...[more]

Similar Datasets

Proteomics Global proteome analysis of paired colorectal cancer sample using LC-MS/MS
2020-09-30 | PXD019504 | Pride
Other Test Project Title
2007-10-23 | PRD000036 | Pride
Genomics Public Test Project
| PRJEB83722 | ENA
Genomics Bakta test project
| PRJEB44484 | ENA
Genomics test project 20180517
| PRJEB27041 | ENA
Genomics Private Test Project 2
| PRJEB83723 | ENA
Genomics project test 20180601-02
| PRJEB27080 | ENA
Genomics test project 201806-01
| PRJEB27082 | ENA
Transcriptomics Genome-wide expression study of the early/innate responses of murine B and T cells to MCMV infection
2013-04-03 | E-GEOD-45365 | biostudies-arrayexpress
Transcriptomics Genome-wide expression study of the responses of murine NK cells and dendritic cell subsets to MCMV infection
2012-10-17 | E-GEOD-39555 | biostudies-arrayexpress