Proteomics

Dataset Information

0

Phactr1/PP1 phosphatase substrates in mouse NIH3T3 fibroblasts


ABSTRACT: It was previously shown that expression of an activated Phactr1 mutant (Phactr1XXX) that constitutively forms the Phactr1/PP1 phosphatase holoenzyme, induces F-actin rearrangements in NIH3T3 fibroblasts. Expression of the Phactr1 PP1-binding domain (C-terminal) alone is also sufficient to induce such cytoskeletal changes. In contrast, expression of Phactr1XXXC derivative, which lacks the PP1 binding sequences does not result in alteration of cytoskeletal morphology (Wiezlak et al., 2012). These observations suggest that Phactr1/PP1 dephosphorylates target proteins involved in cytoskeletal dynamics. To identify potential Phactr1/PP1 substrates, we used differential SILAC phosphoproteomics in NIH3T3 cells inducibly expressing Phactr1XXX, Phactr1XXXC constructs or vector alone. Over 3000 phosphorylation sites were quantified, among which we determined Phactr1/PP1 target dephosphorylation sites by comparative analysis.

INSTRUMENT(S): LTQ Orbitrap Velos

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Fibroblast

SUBMITTER: Roman Fedoryshchak  

LAB HEAD: Richard Treisman

PROVIDER: PXD019977 | Pride | 2020-10-28

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
AnalysisfibroblastPhactr1-PP1phosphoproteomicsPerseus1402.sps Other
Proteomicsquantificationtable.xlsx Xlsx
TRA7156A13RW10_MK_A1.raw Raw
TRA7156A13RW8_MK_A1.raw Raw
TRA7156A13RW9_MK_A1.raw Raw
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Publications

Eosinophil extracellular DNA traps in skin diseases.

Simon Dagmar D   Hoesli Susanne S   Roth Nina N   Staedler Simon S   Yousefi Shida S   Simon Hans-Uwe HU  

The Journal of allergy and clinical immunology 20110101 1


<h4>Background</h4>In the skin, eosinophils are found in a broad spectrum of diseases, including infectious diseases.<h4>Objective</h4>In this study, we investigated whether eosinophil extracellular traps, structures containing DNA in association with eosinophil granule proteins able to bind and kill bacteria, are present in the skin under various pathologic conditions.<h4>Methods</h4>Immunofluorescence staining was performed on sections of paraformaldehyde-fixed and paraffin-embedded skin biops  ...[more]

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