Proteomics

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TMT-based quantitative proteomic analysis reveals defense mechanism of wheat against the crown rot pathogen Fusarium pseudograminearum


ABSTRACT: Abstract Background: Fusarium crown rot is major disease in wheat. However, the wheat defense mechanisms against this disease remain poorly understood. Results: Using tandem mass tag (TMT) quantitative proteomics, we evaluated a disease-susceptible (UC1110) and a disease-tolerant (PI610750) wheat cultivar inoculated with Fusarium pseudograminearum WZ-8A. The morphological and physiological results showed that the average root diameter and malondialdehyde content in the roots of PI610750 decreased 3 days post-inoculation (dpi), while the average number of root tips increased. Root vigor was significantly increased in both cultivars, indicating that the morphological, physiological, and biochemical responses of the roots to disease differed between the two cultivars. TMT analysis showed that 366 differentially expressed proteins (DEPs) were identified by Gene Ontology and Kyoto Encyclopedia of Genes and Genomes enrichment in the two comparison groups, UC1110_3dpi/UC1110_0dpi (163) and PI610750_3dpi/PI610750_0dpi (203). It may be concluded that phenylpropanoid biosynthesis (8), secondary metabolite biosynthesis (12), linolenic acid metabolites (5), glutathione metabolism (8), plant hormone signal transduction (3), MAPK signaling pathway-plant (4), and photosynthesis (12) contributed to the defense mechanisms in wheat. Protein-protein interaction network analysis showed that the DEPs interacted in both sugar metabolism and photosynthesis pathways. Sixteen genes were validated by real-time quantitative polymerase chain reaction and were found to be consistent with the proteomics data. Conclusion: The results provided insight into the molecular mechanisms of the interaction between wheat and F. pseudograminearum.

INSTRUMENT(S): Q Exactive Plus

ORGANISM(S): Fusarium Pseudograminearum Triticum Aestivum (wheat)

SUBMITTER: Dexian He  

LAB HEAD: Dexian He

PROVIDER: PXD023314 | Pride | 2021-01-04

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
7662TQ_01_1.raw Raw
7662TQ_01_10.raw Raw
7662TQ_01_11.raw Raw
7662TQ_01_12.raw Raw
7662TQ_01_13.raw Raw
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