Proteomics

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Immunopeptidomics-guided warehouse design for peptide-based immunotherapy in chronic lymphocytic leukemia


ABSTRACT: In recent years the clinical success of T cell-based immunotherapy approaches has revolutionized treatment of solid tumors and hematological malignancies. However, still some patients do not respond to available therapies at all, others for limited time only. A promising low side-effect approach is peptide-based immunotherapy, which relies on specific immune recognition of tumor-associated human leucocyte antigen (HLA)-presented peptides. In this study, we developed a workflow for the immunopeptidome-guided design of off-the shelf warehouses for personalized peptide vaccines using the example of chronic lymphocyte leukemia (CLL). The so defined warehouses could provide the basis for different T cell-based immunotherapy approaches such as TCR-engineered T cell transfer or multi-peptide vaccinations. The warehouse approach enables a fast and cost-effective way to provide a personalized T cell-based immunotherapeutic approach. The here defined peptide warehouse is already utilized for a personalized multi-peptide vaccine trial (iVAC-XS15-CLL01, NCT04688385).

INSTRUMENT(S): Orbitrap Fusion Lumos, LTQ Orbitrap XL

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Peripheral Blood Mononuclear Cell

DISEASE(S): Chronic Lymphocytic Leukemia

SUBMITTER: Annika Nelde  

LAB HEAD: Juliane S. Walz

PROVIDER: PXD024871 | Pride | 2021-09-10

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
UPN01_class_I.msf Msf
UPN01_class_II.msf Msf
UPN01_class_II_Rep1.RAW Raw
UPN01_class_II_Rep2.RAW Raw
UPN01_class_I_Rep1.RAW Raw
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Publications


Antigen-specific immunotherapies, in particular peptide vaccines, depend on the recognition of naturally presented antigens derived from mutated and unmutated gene products on human leukocyte antigens, and represent a promising low-side-effect concept for cancer treatment. So far, the broad application of peptide vaccines in cancer patients is hampered by challenges of time- and cost-intensive personalized vaccine design, and the lack of neoepitopes from tumor-specific mutations, especially in l  ...[more]

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