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Proteomic Analysis of Integrin a5 Associated Complexes Dependent upon Integrin Activation State in Zebrafish

ABSTRACT: Integrins are a major class of heterodimeric adhesion receptors composed of an a and b subunit that link the extracellular matrix (ECM) and the cytoskeleton across the cell membrane. When activated by either the intracellular (inside-out signaling) or extracellular (outside-in signaling) environment, integrins undergo a conformational change that increases the ligand binding affinity. As the primary receptor for ECM protein fibronectin, Integrin a5 plays a critical role in zebrafish somitogenesis. To better understand integrin activation in this context, we performed co-immunoprecipitation and Mass Spectrometry (MS) based proteomics using FLAG-tagged Integrin a5 alleles that alter it activation state: constitutive active mutant a5GAAKR and inactive ligand binding deficient mutant a5FYLDD, expressed in maternal zygotic a5 mutant (MZa5-/-) embryos. Our data provide an overview of Integrin associated proteins according to the activation state of the Integrin.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Danio Rerio (zebrafish) (brachydanio Rerio)

SUBMITTER: Scott Holley

LAB HEAD: Scott A. Holley

PROVIDER: PXD024942 | Pride | 2021-05-27

REPOSITORIES: Pride

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Dataset's files

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			Action	DRS
	QEp19-1919_Sun_L31-_1_.msf	Msf
	QEp19-1919_Sun_L31-_1_.mzid	Mzid
	QEp19-1919_Sun_L31-_1_.mzid_QEp19-1919_Sun_L31-_1_.MGF	Mzid
	QEp19-1920_Sun_L32-_1_.msf	Msf
	QEp19-1920_Sun_L32-_1_.mzid	Mzid

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