Proteomics

Dataset Information

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Peripheral blood proteomic signature of newly diagnosed prostate cancer


ABSTRACT: Prostate cancer (PCa) is the most common malignant tumour, with high incidence rates and heterogeneity in men around the world. It is becoming an increasing burden on the health care system due to lack of tests for precise detection of disease, risk assessment and response to treatments. We used SWATH-MS as a discovery proteomics tool to identify markers in the serum of newly diagnosed PCa patients and healthy controls to facilitate the improved diagnosis. Furthermore, identification and expression of proteins was also determined in patients undergone radiotherapy and prostatectomy for monitoring of the clinical response to respective treatment options. Thus, this study provides the basis for a proteomic signature to improve diagnostics of patients with localised prostate cancer.

INSTRUMENT(S): TripleTOF 6600

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Blood Serum

DISEASE(S): Prostate Adenocarcinoma

SUBMITTER: AMMARA MUAZZAM  

LAB HEAD: Anthony Whetton

PROVIDER: PXD025484 | Pride | 2023-03-11

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
2017_12_22_CSA_CA_11.wiff Wiff
2017_12_22_CSA_CA_11.wiff.scan Wiff
2017_12_22_CSA_CA_24.wiff Wiff
2017_12_22_CSA_CA_24.wiff.scan Wiff
2017_12_22_CSA_CA_3.wiff Wiff
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Publications


Prostate cancer is the most common malignant tumour in men. Improved testing for diagnosis, risk prediction, and response to treatment would improve care. Here, we identified a proteomic signature of prostate cancer in peripheral blood using data-independent acquisition mass spectrometry combined with machine learning. A highly predictive signature was derived, which was associated with relevant pathways, including the coagulation, complement, and clotting cascades, as well as plasma lipoprotein  ...[more]

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