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Digestion of TSN2 and TSN89 synthetic peptides by proteasomes

ABSTRACT: Proteasomes are large multi-subunit enzymes that act as the main producers of antigenic peptides presented at the cell surface to CD8+ T cells. They can simply cut proteins or ligate non-contiguous peptide fragments thereby generating novel sequences, i.e. spliced peptides via a process called proteasome-catalysed peptide splicing (PCPS). In order to benchmark methods for spliced peptide identification, we here perform in vitro digestions of TSN2 and TSN89 synthetic polypeptide substrates by K562-derived 20S proteasome followed by LC-MS/MS measurements using Orbitrap Fusion Lumos mass spectrometer. Michele Mishto, Head of the research group Molecular Immunology at King’s College London and the Francis Crick Institute, London (UK). Email: michele.mishto@kcl.ac.uk

INSTRUMENT(S): Orbitrap Fusion Lumos

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Michele Mishto

LAB HEAD: Juliane Liepe

PROVIDER: PXD025995 | Pride | 2022-12-19

REPOSITORIES: Pride

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			Action	DRS
	20210422_GP100_mix_FusionCEMS.mgf	Mgf
	20210422_GP100_mix_FusionCEMS.raw	Raw
	20210422_WA1_0h_TSN2_FusionCEMS.mgf	Mgf
	20210422_WA1_0h_TSN2_FusionCEMS.raw	Raw
	20210422_WA2_2h_TSN2_FusionCEMS.mgf	Mgf

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