Proteomics

Dataset Information

0

Cholangiocyte organoid culture in hydrogels from decellularized liver tissue


ABSTRACT: Culture of human cholangiocyte organoids in hydrogels derived from healthy liver extracellular matrix (LECM) extracts prepared from decellularized human livers are evaluated in an effort to establish a platform for production of cholangiocyte organoids for clinical regenerative applications. Human intrahepatic cholangiocyte organoids (ICO) grown in hydrogels made from LECM are compared those grown in mouse tumor derived basement membrane extracts (BME). Culture was performed with amino acids labeled with stable heavy isotopes to enable separation of ECM from the hydrogels from that of the produced by the cells with mass spectrometry (MS). MS data were used to evaluate the protein production of ICO comparing the different hydrogel substrates. The study also contains evaluation of the properties of the hydrogel substrates and focuses on expansion and differentiation of the ICO.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Intrahepatic Cholangiocyte, Liver

SUBMITTER: Oskar Rosmark  

LAB HEAD: Prof. Luc van der Laan

PROVIDER: PXD028417 | Pride | 2022-04-13

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
12DI1217BME.raw Raw
12DI1217Trans.raw Raw
12DI1280BME.raw Raw
12DI1280Trans.raw Raw
14DI1273BME.raw Raw
Items per page:
1 - 5 of 10
altmetric image

Publications


Human cholangiocyte organoids are promising for regenerative medicine applications, such as repair of damaged bile ducts. However, organoids are typically cultured in mouse tumor-derived basement membrane extracts (BME), which is poorly defined, highly variable and limits the direct clinical applications of organoids in patients. Extracellular matrix (ECM)-derived hydrogels prepared from decellularized human or porcine livers are attractive alternative culture substrates. Here, the culture and e  ...[more]

Similar Datasets

2022-10-31 | E-MTAB-11149 | biostudies-arrayexpress
2024-07-01 | E-MTAB-14203 | biostudies-arrayexpress
2022-12-26 | E-MTAB-12270 | biostudies-arrayexpress
2022-01-30 | GSE165309 | GEO
2020-06-02 | E-MTAB-8510 | biostudies-arrayexpress
2024-02-28 | E-MTAB-13828 | biostudies-arrayexpress
2022-01-31 | PXD023705 | Pride
2022-02-10 | PXD023694 | Pride
2022-12-10 | GSE220084 | GEO
2022-03-14 | MSV000089054 | MassIVE