Proteomics

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Proteomic analysis of macrophages derived from induced pluripotent stem cells

ABSTRACT: Macrophages (Mɸ) are highly heterogenous and versatile innate immune cells involved in homeostatic and immune responses. Activated Mɸ can exist in two extreme phenotypes: pro-inflammatory (M1) and anti-inflammatory (M2) Mɸ and these phenotypes can be recapitulated in vitro by using lipopolysaccharide (LPS) plus IFNγ and IL-4, respectively. In the recent years, human induced pluripotent stem cells (iPSC) derived-Mɸ have gained major attention since they are functionally similar to human monocyte derived-Mɸ and are receptive to genome editing. In this study, we used quantitative proteomics to address whether the plasticity of iPSC-derived Mɸ (iPSDM) are similar to human monocyte derived Mɸ. Our analyses suggest that iPSC Mɸ are promising tools to understand Mɸ biology since they exhibit similar polarisation profiles and functions as monocyte-derived Mɸ. We believe this comprehensive proteome data set will be a useful resource in the Mɸ field.

INSTRUMENT(S): Q Exactive HF

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Macrophage

SUBMITTER: Gavuthami Murugesan  

LAB HEAD: Professor Paul Crocker

PROVIDER: PXD029776 | Pride | 2022-03-15

REPOSITORIES: Pride

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Dataset's files

Source:
Action DRS
Carbamidomethyl__C_Sites.txt Txt
Cysteinyl_-_carbamidomethylSites.txt Txt
Deamidation__N_Sites.txt Txt
Dioxidation__MW_Sites.txt Txt
GM-M0_1.raw Raw
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Publications

Quantitative Proteomics of Polarised Macrophages Derived from Induced Pluripotent Stem Cells.

Murugesan Gavuthami G   Davidson Lindsay L   Jannetti Linda L   Crocker Paul R PR   Weigle Bernd B  

Biomedicines 20220123 2

Macrophages (M<sub>Φ</sub>) are highly heterogenous and versatile innate immune cells involved in homeostatic and immune responses. Activated M<sub>Φ</sub> can exist in two extreme phenotypes: pro-inflammatory (M1) M<sub>Φ</sub> and anti-inflammatory (M2) M<sub>Φ</sub>. These phenotypes can be recapitulated in vitro by using ligands of toll-like receptors (TLRs) and cytokines such as IFNγ and IL-4. In recent years, human induced pluripotent stem cells (iPSC)-derived M<sub>Φ</sub> have gained maj  ...[more]

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