Ontology highlight
ABSTRACT:
INSTRUMENT(S): LTQ Orbitrap Velos
ORGANISM(S): Homo Sapiens (human) Saccharomyces Cerevisiae (baker's Yeast)
TISSUE(S): Cell Culture
SUBMITTER: Karin Schork
LAB HEAD: Martin Eisenacher
PROVIDER: PXD030577 | Pride | 2022-11-11
REPOSITORIES: Pride
Action | DRS | |||
---|---|---|---|---|
2020_01_31_proteome_S_cerevisae.fasta | Fasta | |||
MaxQuant_contaminants_downloaded_20200527.fasta | Fasta | |||
MaxQuant_output_txt.zip | Other | |||
UPS1_12500amol_R1.raw | Raw | |||
UPS1_12500amol_R2.raw | Raw |
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PloS one 20221021 10
In bottom-up proteomics, proteins are enzymatically digested into peptides before measurement with mass spectrometry. The relationship between proteins and their corresponding peptides can be represented by bipartite graphs. We conduct a comprehensive analysis of bipartite graphs using quantified peptides from measured data sets as well as theoretical peptides from an in silico digestion of the corresponding complete taxonomic protein sequence databases. The aim of this study is to characterize ...[more]