Proteomics

Dataset Information

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TGFB1 induced S100 family protein expression is associated with epithelial to mesenchymal transition states and poor survival in pancreatic cancer


ABSTRACT: Epithelial-mesenchymal transition (EMT) is a continuum that includes epithelial, partial EMT (P-EMT) and mesenchymal states, each of which are associated with cancer progression, invasive capabilities and ultimately metastasis. We have employed a lineage traced sporadic model of pancreatic cancer to generate a murine organoid biobank from primary and secondary tumors, including sublines that have undergone P-EMT and complete EMT (C-EMT). Using an unbiased quantitative proteomics approach, we found that the morphology of the organoids could predict EMT state, with solid organoids associated with a C-EMT signature. We also observed that exogenous TGFb1 could induce a solid organoid morphology that was associated with changes in the S100 family of proteins and the formation of high-grade tumors. Our work reveals that S100A4 may represent a useful biomarker to predict EMT state, disease progression and outcome.

INSTRUMENT(S): timsTOF Pro

ORGANISM(S): Mus Musculus (mouse)

TISSUE(S): Primary Cell

DISEASE(S): Pancreatic Ductal Adenocarcinoma

SUBMITTER: Laura Dagley  

LAB HEAD: Tracy Putoczki

PROVIDER: PXD030992 | Pride | 2023-02-24

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
DIANN_libfree.zip Other
Fragger_Tables.zip Other
P3945_10_1_1_4638.d.zip Other
P3945_11_1_1_4645.d.zip Other
P3945_12_1_1_4642.d.zip Other
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