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Mass spectrometry and phosphorylation analysis of ORC1 protein, wild type or RNA-binding mutant (R441A, R444A and R465A), in GAA-RNA (RNA interactors of ORC1 identified by RIP-seq and iCLIP) knockdown or control conditions.

ABSTRACT: Mass spectrometry of wild type or mutant (RNA-binding) ORC1. Experiments were done in cellstransfected with a control ASO or an anti-GAA ASO, to knockdown RNA interactors of ORC1.

INSTRUMENT(S): LTQ Orbitrap Velos Pro

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Epithelial Cell, Cell Culture

DISEASE(S): Colon Cancer

SUBMITTER: Aina Maria Mas

LAB HEAD: Maite Huarte

PROVIDER: PXD043232 | Pride | 2023-10-24

REPOSITORIES: Pride

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			Action	DRS
	83600_98293.pep.xml	Pepxml
	83601_98294.pep.xml	Pepxml
	83670_98293.pep.xml	Pepxml
	83671_98294.pep.xml	Pepxml
	84832_99400.pep.xml	Pepxml

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Publications

ORC1 binds to cis-transcribed RNAs for efficient activation of replication origins.

Mas Aina Maria AM Goñi Enrique E Ruiz de Los Mozos Igor I Arcas Aida A Statello Luisa L González Jovanna J Blázquez Lorea L Lee Wei Ting Chelsea WTC Gupta Dipika D Sejas Álvaro Á Hoshina Shoko S Armaos Alexandros A Tartaglia Gian Gaetano GG Waga Shou S Ule Jernej J Rothenberg Eli E Gómez María M Huarte Maite M

Nature communications 20230724 1

Cells must coordinate the activation of thousands of replication origins dispersed throughout their genome. Active transcription is known to favor the formation of mammalian origins, although the role that RNA plays in this process remains unclear. We show that the ORC1 subunit of the human Origin Recognition Complex interacts with RNAs transcribed from genes with origins in their transcription start sites (TSSs), displaying a positive correlation between RNA binding and origin activity. RNA dep ...[more]

PMID: 37488096

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2023-02-13 | PXD038783 | Pride

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