Proteomics

Dataset Information

0

Integrated widely targeted metabolomics and network pharmacology revealed quality disparities between Guizhou and conventional producing areas of Codonopsis Radix


ABSTRACT: With the internationalization of traditional Chinese medicine, the demand for medicinal and edible Codonopsis Radix (CR) is increasing, and its medicinal resources have attracted atten- tion. CR is a famous traditional Chinese medicine with a long pharmaceutical and edible history. Guizhou has abundant CR resources, but in the absence of systematic studies on species identifi- cation and chemical compositions, it has not been fully utilized. The results of plant traits and DNA barcoding molecular identification indicated that Luodang (LD) and Weidang (WD) from Guizhou were Codonopsis tangshen, C. pilosula., respectively. Widely targeted metabolomics analysis revealed that a total of 1116 metabolites from 14 categories, including phenolic acids, lipids, flavonoids, etc., were found in LD, WD, and the three Chinese Pharmacopoeia CR. CRs shared 1054 (94.4%) me- tabolites, with extremely similar metabolite profiles. Affected by Guizhou's particular climate, LD and WD each contained 3 and 10 dominant differential metabolites, respectively, which were pri- marily flavonoids and amino acids. Amino acids, phenolic acids, and organic acids play important roles in the excellent food attributes of them. In CR, 8 dominant differential metabolites were dis- covered for the first time, including isoorientin-7-O-(6′′-feruloyl) glucoside, N-formyl-L-methionine, and cyclo (Phe-Glu), etc. Network pharmacology analyses showed that LD dominant differential metabolites were closely related to anti-tumor, cardiovascular disease improvement, nervous system protection, and metabolic disease treatment, whereas WD was closely related to nervous system protection and cardiovascular disease improvement. In conclu- sion, LD and WD can be used and promoted medicinally as CR and have potential value for new drug development. This work enriched the database of CR compounds and provided a reference for quality control, resource development, and new drug development of CR

INSTRUMENT(S): Q TRAP

ORGANISM(S): Codonopsis

TISSUE(S): Root

SUBMITTER: kaixian zhang  

LAB HEAD: Kaixian Zhang

PROVIDER: PXD044874 | Pride | 2023-10-06

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
checksum.txt Txt
codex.xlsx Xlsx
datebase_search_result.rar Other
original_data.rar Other
Items per page:
1 - 4 of 4

Similar Datasets

2015-09-21 | E-GEOD-69785 | biostudies-arrayexpress
2010-12-01 | E-GEOD-24997 | biostudies-arrayexpress
2015-09-21 | GSE69785 | GEO
2021-04-24 | GSE155403 | GEO
2024-01-29 | GSE254419 | GEO
2015-12-31 | E-GEOD-51363 | biostudies-arrayexpress
2022-10-19 | GSE184873 | GEO
2022-10-19 | GSE184872 | GEO
2014-03-15 | GSE52109 | GEO
2014-03-15 | E-GEOD-52109 | biostudies-arrayexpress