Proteomics

Dataset Information

0

Dehydroalanine and Dehydrobutyrine in Aging and Cataractous Lenses


ABSTRACT: Protein post-translational modifications (PTMs) have been associated with aging and age-related diseases. PTMs are particularly impactful in long-lived proteins, such as those found in the ocular lens, because they accumulate with age. Two post-translational modifications that lead to protein-protein crosslinks in aged and cataractous lenses are dehydroalanine (DHA) and dehydrobutyrine (DHB); formed from cysteine/serine and threonine residues, respectively. The purpose of this study was to quantitate DHA and DHB in human lens proteins as a function of age and cataract status. Human lenses of various ages were divided into five donor groups: transparent lenses (18–22-year-old, 48–64-year-old, and 70–93-year-old) and cataractous human lenses of two age groups (48–64-year-old lenses, and 70–93-year-old lenses) and were subjected to proteomic analysis. Relative DHA and DHB peptide levels were quantified and compared to their non-modified peptide counterparts. For most lens proteins containing DHA or DHB, higher amounts of DHA- and DHB-modified peptides were detected in aged and cataractous lenses. DHA-containing peptides were classified into three groups based on abundance changes with age and cataract: those that (1) increased only in age-related nuclear cataract (ARNC), (2) increased in aged and cataractous lenses, and (3) decreased in aged lenses and ARNC. There was no indication that DHA or DHB levels were dependent on lens region. In most donor groups, proteins with DHA and DHB were more likely to be found among urea-insoluble proteins rather than among water- or urea-soluble proteins. DHA and DHB formation may induce structural effects that make proteins less soluble in water that leads to age-related protein insolubility and possibly aggregation and light scattering.

INSTRUMENT(S): Q Exactive

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Lens Fiber Cell, Lens

DISEASE(S): Senile Cataract

SUBMITTER: Zhen Wang  

LAB HEAD: Kevin Schey

PROVIDER: PXD045734 | Pride | 2023-10-12

REPOSITORIES: Pride

Dataset's files

Source:
Action DRS
ah_4030_ZW_021915_UIF_IC_56yo.raw Raw
ah_4030_ZW_021915_UIF_N_56yo.raw Raw
ah_4030_ZW_021915_UIF_OC2_56yo.raw Raw
ah_4068_ZW_032115_UIF_IC_57yo.raw Raw
ah_4068_ZW_032115_UIF_N_57yo.raw Raw
Items per page:
1 - 5 of 219
altmetric image

Publications

Dehydroalanine and dehydrobutyrine in aging and cataractous lenses reveal site-specific consequences of spontaneous protein degradation.

Paredes Jessica J   Wang Zhen Z   Patel Purvi P   Rose Kristie L KL   Schey Kevin L KL  

Frontiers in ophthalmology 20231026


<h4>Introduction</h4>Protein post-translational modifications (PTMs) have been associated with aging and age-related diseases. PTMs are particularly impactful in long-lived proteins, such as those found in the ocular lens, because they accumulate with age. Two PTMs that lead to protein-protein crosslinks in aged and cataractous lenses are dehydroalanine (DHA) and dehydrobutyrine (DHB); formed from cysteine/serine and threonine residues, respectively. The purpose of this study was to quantitate D  ...[more]

Similar Datasets

2020-03-04 | GSE135000 | GEO
2021-07-10 | GSE166619 | GEO
2016-09-29 | PXD001630 | Pride
2016-09-29 | PXD001593 | Pride
2021-08-05 | GSE181358 | GEO
2015-05-01 | E-GEOD-65500 | biostudies-arrayexpress
2010-12-01 | E-GEOD-22362 | biostudies-arrayexpress
2011-01-01 | E-GEOD-22322 | biostudies-arrayexpress
2018-05-11 | GSE101393 | GEO
2022-11-07 | MTBLS740 | MetaboLights