Proteomics

Dataset Information

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ProtGraph re-analysis of HCC dataset


ABSTRACT: This is a re-analysis of the dataset deposited in PXD002171 (DOI: 10.1021/acs.jproteome.5b00420, PubMed: 26626371) with databases created by ProtGraph. We only changed the data processing, the sample creation and processing is the same as in the original submission. ProtGraph allows to incorporate variant and further feature information, which changes the amino acid composition of consensus/canonical sequences in a database and is commonly not used in the database analysis.

INSTRUMENT(S): LTQ Orbitrap Elite

ORGANISM(S): Homo Sapiens (human)

TISSUE(S): Liver

SUBMITTER: Julian Uszkoreit  

LAB HEAD: Julian Uszkoreit

PROVIDER: PXD053196 | Pride | 2025-01-17

REPOSITORIES: pride

Dataset's files

Source:
Action DRS
20230619_homo_sapiens_proteome.fasta Fasta
20230619_homo_sapiens_proteome.txt Txt
OEI06439.common.mzid.gz Mzid
OEI06439.global_peptides.mzid.gz Mzid
OEI06439.mgf Mgf
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