Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Oryza sativa Japonica Group

ABSTRACT: Genome editing with FnCas12a using crRNA with altered target length in Oryza sativa

PROVIDER: PRJDB10598 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR248839_1.fastq.gz	Fastqsanger.gz
	DRR248839_2.fastq.gz	Fastqsanger.gz
	DRR248840_1.fastq.gz	Fastqsanger.gz
	DRR248840_2.fastq.gz	Fastqsanger.gz
	DRR248841_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Oryza sativa Japonica cultivar:Kitaake Transcriptome or Gene expression

Project description:RNA-seq of Oryza sativa Japonica cultivar Kitaake

2015-02-11 | E-MTAB-4326 | biostudies-arrayexpress

Oryza sativa Japonica Group

Project description:Genome editing with miniature size Cas nuclease SpCas12f in Oryza sativa

| PRJDB14603 | ENA

Oryza sativa Japonica Group

Project description:Oryza Sativa Transcriptome

| PRJNA528350 | ENA

Transcriptome profiling in reciprocal hybrids and tetraploids constructed from subspecies japonica and indica of Asian rice (Oryza sativa L.)

Project description:Hybrids and allopolyploids typically exhibit radically altered gene expression patterns relative to their parents, a phenomenon termed âtranscriptomic shock.â To distinguish the effects of hybridization from polyploidization on coregulation of divergent alleles, we analyzed expression of parental copies (homoeologs) of 11,608 genes using RNA-seq-based transcriptome profiling in reciprocal hybrids and tetraploids constructed from subspecies japonica and indica of Asian rice (Oryza sativa L.)

2014-02-18 | E-MTAB-4271 | biostudies-arrayexpress

Salt stress in salt sensitive Oryza sativa Indica group IR29

Project description:Oryza sativa Indica group IR29 (salt sensitive) seedlings were subjected to salt stress or control conditions and sampled at five time points over the course of 24 hours. RNA samples extracted were assayed using the Illumina HiSeq 2000 platform.

2017-10-02 | E-MTAB-1913 | biostudies-arrayexpress

Oryza sativa Japonica Group

Project description:Oryza sativa Japonica Group transcriptome

| PRJNA391025 | ENA

Oryza sativa Japonica Group

Project description:Oryza sativa Japonica Group Proteome

| PRJNA836170 | ENA

Oryza sativa Japonica Group

Project description:Oryza sativa Japonica Group Variation

| PRJNA253261 | ENA

Global PTM Mapping for Lysine 2-hydroxyisobutyrylation in one Oryza Sativa Japonica sample

Project description:By the combination of affinity enrichment and high-resolution LC-MS/MS analysis, large-scale lysine 2-hydroxyisobutyrlome analysis was performed in Oryza Sativa. Altogether, 9916 lysine 2-hydroxyisobutyrylation sites in 2512 protein groups were identified. Intensive bioinformatic analysis was then carried out to annotate those lysine 2-hydroxyisobutyrylated targets, including protein annotation, functional classification, functional enrichment, functional enrichment-based cluster analysis, etc. Based on the results, further studies following the large-scale lysine 2-hydroxyisobutyrylome analysis were suggested.

2018-10-26 | PXD005986 | Pride

Salt stress in salt sensitive Oryza sativa Indica group Pokkali (salt sensitive)

Project description:Oryza sativa Indica group Pokkali (salt sensitive) seedlings were subjected to salt stress or control conditions and sampled at five time points over the course of 4 hours. RNA samples extracted were assayed using the Illumina HiSeq 2000 platform.

2020-01-01 | E-MTAB-1914 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data