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Sus scrofa domesticus strain:Iberian breed

ABSTRACT: Whole genome sequencing of Iberian pigs

PROVIDER: PRJDB13560 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	DRR374741_1.fastq.gz	Fastqsanger.gz
	DRR374741_2.fastq.gz	Fastqsanger.gz
	DRR374742_1.fastq.gz	Fastqsanger.gz
	DRR374742_2.fastq.gz	Fastqsanger.gz
	DRR374743_1.fastq.gz	Fastqsanger.gz

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Sus scrofa domesticus strain:Guadyerbas Iberian pig breed

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Protist enteroparasites in wild boar (Sus scrofa ferus) and black Iberian pig (Sus scrofa domesticus) in southern Spain: a protective effect on hepatitis E acquisition?

Project description:BACKGROUND:Several studies have independently evaluated the occurrence of hepatitis E virus (HEV) and enteroparasites in swine, but no surveys have been conducted to jointly assess the prevalence and genetic diversity of enteroparasites in pigs and wild boars, their sympatric transmission between hosts, and their potential interaction with HEV. METHODS:We prospectively collected serum and faecal samples from black Iberian domestic pigs and wild boars from southern Spain between 2015?2016. We evaluated for HEV in serum and faeces, and for the presence of enteroparasites (Giardia duodenalis, Cryptosporidium spp., Blastocystis sp., Neobalantidium coli and Strongyloides spp.) in the same faecal samples. The prevalence of each intestinal parasite species was calculated. RESULTS:A total of 328 animals (56.7% black Iberian pigs and 43.3% wild boars) were included in the study. The overall global prevalence of HEV in serum was 16.8%. The overall global prevalence of each enteroparasite species was 19.5% for G. duodenalis, 8.2% for Cryptosporidium spp., 41.8% for Blastocystis sp., 31.4% for N. coli, and 8.8% for Strongyloides spp. HEV-infected animals showed a significantly lower prevalence of G. duodenalis (3.2 vs 20%; P?=?0.002) and Blastocystis sp. (38.7 vs 80%; P?<?0.001) than those uninfected by HEV. Animals carrying G. duodenalis and Blastocystis sp. infections showed a significantly lower rate of HEV infection than those not harbouring these enteroparasites (P?<?0.001). CONCLUSIONS:Our study found a high prevalence of enteroparasites in black Iberian pigs and wild boars in southern Spain, suggesting a sympatric co-transmission of some of the species investigated. It is suggested that extracellular G. duodenalis and Blastocystis sp. might have a protective effect on HEV acquisition in swine.

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