Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Fungi

ABSTRACT: Pieris japonica (Ericaceae) root associated fungi

PROVIDER: PRJDB16490 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR499745_1.fastq.gz	Fastqsanger.gz
	DRR499745_2.fastq.gz	Fastqsanger.gz
	DRR499746_1.fastq.gz	Fastqsanger.gz
	DRR499746_2.fastq.gz	Fastqsanger.gz
	DRR499747_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Bacteria

Project description:Pieris japonica (Ericaceae) dominant in the forest understory

| PRJDB16451 | ENA

Root associated fungi metagenome

Project description:Root associated fungi metagenome Metagenome

| PRJNA645727 | ENA

Genomic and transcriptomic analyses of sebacinoid fungi

Project description:The recent release of a large number of genomes from ectomycorrhizal, orchid mycorrhizal and root endophytic fungi have provided deep insight into fungal lifestyle-associated genomic adaptation. Comparative analyses of symbiotic fungal taxa showed that similar outcomes of interactions in distant related root symbioses are examples of convergent evolution. The order Sebacinales represents a sister group to the Agaricomycetes (Basidiomycota) that is comprised of ectomycorrhizal, ericoid-, orchid- mycorrhizal, root endophytic fungi and saprotrophs (Oberwinkler et al., 2013). Sebacinoid taxa are widely distributed from arctic to temperate to tropical ecosystems and are among the most common and species-rich groups of ECM, OM and endophytic fungi (Tedersoo et al., 2012, Tedersoo et al., 2010, Oberwinkler et al., 2013). The root endophyte Piriformospora indica and the orchid mycorrhizal fungus S. vermifera (MAFF 305830) are non-obligate root symbionts which were shown to be able to interact with many different experimental hosts, including the non-mycorrhizal plant Arabidopsis thaliana. These two fungi display similar colonization strategies in barley and in Arabidopsis and the ability to establish beneficial interactions with different hosts (Deshmukh et al., 2006). Colonization of the roots by P. indica and S. vermifera results in enhanced seed germination and biomass production as well as increased resistance against biotic and abiotic stresses in its experimental hosts, including various members of the Brassicaceae family, barley, Nicotiana attenuata and switchgrass (Ghimire, 2011, Ghimire et al., 2009, Ghimire et al., 2011, Waller et al., 2008, Barazani et al., 2007, Deshmukh et al., 2006). Microarray experiments were performed to identify and characterize conserved sebacinoid genes as key determinants in the Sebacinales symbioses.

2015-06-01 | GSE60736 | GEO

fungi

Project description:fungi in the root of orchids Metagenome

| PRJNA416062 | ENA

Proteomics of endophytic fungi enhance plant growth promotion in rice root

Project description:Endophytic fungi are root-inhabiting fungi that can promote plant growth in a variety of ways. They can directly stimulate plant growth by producing phytohormones, such as auxin and gibberellins. They can also indirectly promote plant growth by helping plants to acquire nutrients, such as nitrogen and phosphorus, and by protecting plants from pests and pathogens.In this study, we used a proteomic approach to identify the proteins that are expressed in rice plants after they are treated with endophytic fungi. We found that the treatment with endophytic fungi resulted in the expression of a number of proteins involved in plant growth, nutrient acquisition, and defense. These results suggest that endophytic fungi can promote plant growth and improve plant resilience to stress.

2024-09-10 | PXD045242 | JPOST Repository

Orchid associated fungi from root and rhizosphere soil

Project description:Orchid associated fungi from root and rhizosphere soil Metagenome

| PRJNA693177 | ENA

Effects of Mucosa associated fungi on IEC

Project description:RNAseq of intestinal epithelial cells from ASF Mice colonized with a consortium of mucosa associated fungi

2021-12-30 | GSE141622 | GEO

Fungi

Project description:Pieris dominant effects on the soil microbiomes

| PRJDB16482 | ENA