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Gill metagenome

ABSTRACT: Microbiome analysis in the gills of kuruma shrimp Penaeus japonicus infected with Fusarium disease

PROVIDER: PRJDB17233 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	DRR522934_1.fastq.gz	Fastqsanger.gz
	DRR522934_2.fastq.gz	Fastqsanger.gz
	DRR522935_1.fastq.gz	Fastqsanger.gz
	DRR522935_2.fastq.gz	Fastqsanger.gz
	DRR522936_1.fastq.gz	Fastqsanger.gz

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Penaeus japonicus

Project description:Transcriptome analysis in the gills of kuruma shrimp Penaeus japonicus infected with Fusarium disease

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Project description:To present, the only known inv*olvement of the gills in the immune response of shrimp is solely assisting the hemocytes in filtering out the harmful factors. This global expression of novel genes revealed several immune-related genes specifically expressed in high amounts only in gills. This data provide new insights on the immune defense of shrimp.

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Penaeus japonicus

Project description:Raw DNA and RNA sequence reads from diseased Kuruma shrimp (Penaeus japonicus)

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Project description:Microarray analysis of the gill tissues of WSSV infected shrimp (P. monodon) at different time intervals 6 hrs, 24 hrs, 48 hrs and moribund stage of post WSSV infection was carried out to identify differentially expressed genes in response to WSSV infection. The shrimps in WSSV challenege experiment were challenged through intra muscular route with known concentration of virus. The important immune genes identified would be further characterized by sequence analysis and gene expression profile would be validated by real time PCR One-color experiment,Organism: Penaeus monodon, Custom Penaeus monodon (Black Tiger Shrimp) 8x60k designed by Genotypic Technology Private Limited (AMADID: 041733), Labeling kit: Agilent Quick-Amp labeling Kit (p/n5190-0442)

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Project description:Analysis of intestinal microbiota of the kuruma shrimp Penaeus japonicus under different bait feedings

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Project description:Transcriptome sequencing of the kuruma shrimp Marsupenaeus japonicus

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Project description:Genome sequencing of the kuruma shrimp Marsupenaeus japonicus

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The immune defense of shrimp gills through Marsupenaeus japonicus gill C-type lectin (MjGCTL)

Project description:The immune defense of shrimp gills through Marsupenaeus japonicus gill C-type lectin (MjGCTL)

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Project description:The salmon gill poxvirus (SGPV) is a large DNA virus that infects gill epithelial cells in Atlantic salmon and is associated with acute high mortality disease outbreaks in aquaculture. The pathological effects of SGPV infection include gill epithelial apoptosis in the acute phase of the disease and hyperplasia of gill epithelial cells in surviving fish, causing damage to the gill respiratory surface. Transcriptome responses to virus were assessed in gills at different stages of disease

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