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Paragorgia papillata

ABSTRACT: mitochondrial genome of Paragorgia papillata

PROVIDER: PRJDB17833 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	DRR541556_1.fastq.gz	Fastqsanger.gz
	DRR541556_2.fastq.gz	Fastqsanger.gz

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The complete mitochondrial genome of the bubble-gum coral <i>Paragorgia papillata</i> (Octocorallia: Coralliidae) from the seamount in the tropical Western Pacific.

Project description:The complete mitochondrial genome of Paragorgia papillata Li et al. 2021, a deep-sea gorgonian inhabiting at 858 m in Caroline Ridge, was obtained in this study. The length of the mitochondrial genome is 19,018 bp with 14 protein coding genes, one transfer RNA (tRNA-Met) and two ribosomal RNA genes contained in this circular molecule. Phylogenetic analysis indicated that P. papillata and P. coralloides Bayer, 1993 were two closely related species, and a total of 26 mutational sites (four nonsynonymous mutations included) can be detected between their mitochondrial genomes. This exhibits a case that mitochondrial genomes can be applied to differentiate closely related species in gorgonians. The phylogenetic tree constructed with mitochondrial genomes showed that the families in Octocorallia are reciprocally monophyletic, provided that the family names were revised according to the systematic revision of Octocorallia guided by phylogenomics. However, the relationships of the families within each order were different between the previous phylogenomic work and ours. Integrating mitochondrial genomes from a wider array of Octocorallia families is essential for a more accurate comparison of phylogenies derived from nuclear and mitochondrial sequences in future study.

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Biosynthesized silver nanoparticles have anticoccidial and jejunum-protective effects in mice infected with Eimeria papillata.

Project description:Eimeriosis, an infection with Eimeria spp. that affects poultry, causes huge economic losses. Silver nanoparticles (AgNPs) have antibacterial and antifungal properties, but their action against Eimeria infection has not yet been elucidated. This study demonstrates the action of AgNPs in the treatment of mice infected with Eimeria papillata. AgNPs were prepared from Zingiber officinale rhizomes. Phytochemical screening by gas chromatography-mass spectrometry analysis (GC-MS) was used to detect active compounds. Mice were divided into five groups: uninfected mice, uninfected mice that were administered AgNPs, untreated mice infected with 103 sporulated oocysts of E. papillata, infected mice treated with AgNPs, and infected mice treated with amprolium. Characterization of the samples showed the AgNPs to have nanoscale sizes and aspherical shape. Phytochemical screening by GC-MS demonstrated the presence of 38 phytochemical compounds in the extract of Z. officinale. Mice infected with E. papillata-sporulated oocysts were observed to have many histopathological damages in the jejuna, including a decrease in the goblet cell numbers affecting the jejunal mucosa. Additionally, an increased oocyst output was also observed. The treatment of infected mice with AgNPs resulted in the improvement of the jejunal mucosa, increase in the number of goblet cell, and decrease in the number of meronts, gamonts, and developing oocysts in the jejuna. Moreover, AgNPs also led to decreased oocyst shedding in feces. The results revealed AgNPs to have an anticoccidial effect in the jejunum of E. papillata-infected mice and, thus, could be a potential treatment for eimeriosis.

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