Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Drosophila melanogaster

ABSTRACT: RNA-seq analysis of MZD-overexpressed Drosophila embryos

PROVIDER: PRJDB3787 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR031744.fastq.gz	Fastqsanger.gz
	DRR031745.fastq.gz	Fastqsanger.gz
	DRR031746.fastq.gz	Fastqsanger.gz
	DRR031747.fastq.gz	Fastqsanger.gz
	DRR031748.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Drosophila melanogaster

Project description:RNA-seq of Drosophila 0-2 hr embryos

| PRJNA284910 | ENA

Drosophila melanogaster

Project description:RNA-seq analysis of Drosophila melanogaster embryos infected and uninfected with male-killing Spiroplasma

| PRJDB4469 | ENA

Drosophila melanogaster

Project description:RNA-seq of Drosophila 0-2 hr embryos Rnase R

| PRJNA352382 | ENA

Drosophila melanogaster

Project description:ELAV ChIP-seq in Drosophila melanogaster embryos

| PRJNA267499 | ENA

Drosophila melanogaster nuclear matrix proteome

Project description:Nucleus is a highly structured organelle and contains many functional compartments. While the structural basis for this complex spatial organization of compartments is unknown, a major component of this organization is likely to be the non-chromatin scaffolding called nuclear matrix (NuMat). Experimental evidence over the past decades indicates that most of the nuclear functions are at least transiently associated with the NuMat although the components of NuMat itself are poorly known. Here, we report NuMat proteome analysis from Drosophila melanogaster embryos and discuss its links with nuclear architecture and functions. In the NuMat proteome, we find structural proteins, chaperones related, DNA/RNA binding, chromatin remodeling and transcription factors. This complexity of NuMat proteome is an indicator of its structural and functional significance. Comparison of the 2D profile of NuMat proteome from different developmental stages of Drosophila embryos shows that less than half of the NuMat proteome is constant and rest of the proteins are stage specific dynamic components. This NuMat dynamics suggests a possible functional link between NuMat and the embryonic development. Finally, we also show that a subset of NuMat proteins remain associated with the mitotic chromosomes implicating their role in mitosis and possibly the epigenetic cellular memory. NuMat proteome analysis provides tools and opens up ways to understand nuclear organization and function.

2011-05-05 | PRD000255 | Pride

Drosophila melanogaster

Project description:RNA Seq analysis of 2.5 hour embryos of Drosophila melanogaster in the absence of Ataxin-7 or non-stop.

| PRJNA386531 | ENA

Bicoid binding along anteroposterior axis of Drosophila Melanogaster embryos

Project description:ChIP-Seq against Bicoid on manually dissected posterior thirds of Drosophila Melanogaster early stage 5 embryos.

2017-10-04 | GSE103695 | GEO

Drosophila melanogaster

Project description:wounded versus nonwounded drosophila embryos

| PRJNA109001 | ENA

Drosophila melanogaster

Project description:ATAC-seq analysis of chromatin accessibility and nucleosome positioning in Drosophila melanogaster precellular blastoderm embryos

| PRJNA327205 | ENA

Drosophila melanogaster

Project description:ACF1 regulates nucleosome spacing in Drosophila euchromatin [Mnase-seq embryos]

| PRJNA338368 | ENA