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Streptomyces

ABSTRACT: Draft genome sequences of pathogenic Streptomyces spp., the causal of potato common scab disease in Japan

PROVIDER: PRJDB4008 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	DRR046673_1.fastq.gz	Fastqsanger.gz
	DRR046673_2.fastq.gz	Fastqsanger.gz
	DRR046674_1.fastq.gz	Fastqsanger.gz
	DRR046674_2.fastq.gz	Fastqsanger.gz

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Project description:Thaxtomin A is a phytotoxin produced by Streptomyces scabies and other Streptomyces species, the causative agents of common scab disease in potato and other taproot crops. At nanomolar concentrations, thaxtomin causes dramatic cell swelling, reduced seedling growth, and inhibition of cellulose synthesis in Arabidopsis. We identified a mutant of Arabidopsis, designated txr1, that exhibits increased resistance to thaxtomin as a result of a decrease in the rate of toxin uptake. The TXR1 gene was identified by map-based cloning and found to encode a novel, small protein with no apparent motifs or organelle-targeting signals. The protein, which has homologs in all fully sequenced eukaryotic genomes, is expressed in all tissues and during all developmental stages analyzed. Microarray transcript profiling of some 14,300 genes revealed two stomatin-like genes that were expressed differentially in the txr1 mutant and the wild type. We propose that TXR1 is a regulator of a transport mechanism A genetic modification design type is where an organism(s) has had genetic material removed, rearranged, mutagenized or added, such as knock out. Keywords: genetic_modification_design

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