Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Arabidopsis thaliana strain:Col-0

ABSTRACT: Transcriptomic analysis of Arabidopsis roots deprived of boron

PROVIDER: PRJDB6370 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR106422_1.fastq.gz	Fastqsanger.gz
	DRR106422_2.fastq.gz	Fastqsanger.gz
	DRR106423_1.fastq.gz	Fastqsanger.gz
	DRR106423_2.fastq.gz	Fastqsanger.gz
	DRR106424_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Arabidopsis thaliana Col-0 Al stress 6hrs

Project description:Transcriptional profiling of roots in Arabidopsis Col-0 with 10 µM AlCl3 6hrs vs w/o AlCl3 6hrs

2014-10-11 | GSE62238 | GEO

Arabidopsis thaliana ecotype Columbia [Col-0]: incubated with E. coli vs. Control

Project description:To explore mechanisms involved in the plant-microbe interactions, we proceeded with genome-wide transcriptome analysis of Arabidopsis roots incubated with E. coli Bl21 for 24 hours. Control plants did not receive E. coli.

2010-12-01 | GSE22277 | GEO

Arabidopsis thaliana cultivar:col-0

Project description:miRNA sequencing from Arabidopsis roots

| PRJNA508998 | ENA

Arabidopsis thaliana Col-0 Al stress 6hrs

Project description:Transcriptional profiling of roots in Arabidopsis Col-0 with 10 M-BM-5M AlCl3 6hrs vs w/o AlCl3 6hrs 10 M-BM-5M AlCl3 pH5.0 6hrs vs. noAlCl3 pH5.0 6hrs

2014-10-11 | E-GEOD-62238 | biostudies-arrayexpress

Arabidopsis thaliana Col-0 inflorescence small RNAs

Project description:Small RNA sequences from Arabidopsis thaliana Col-0 inflorescence tissues of three biological replicates. The data were analyzed to identify non-templated nucleotides in Arabidopsis small RNAs.

2016-05-18 | GSE79119 | GEO

RNAseq of Arabidopsis thaliana Col-0 inflorescences

Project description:Paired-end Illumina RNA sequencing of Arabidopsis thaliana Col-0 inflorescences

2016-11-14 | GSE74717 | GEO

Arabidopsis thaliana cultivar:Col-0

Project description:Cyst nematode parasitism induces dynamic changes in the epigenome of Arabidopsis roots

| PRJNA353359 | ENA

Arabidopsis thaliana strain:Col-0

Project description:Transcriptomic analysis reveals Arabidopsis Auxin Resistant 1 gene as a key mediator for responses to bacteria.

| PRJNA610417 | ENA

RNA-seq of Arabidopsis thaliana Col-0 siliques

Project description:Paired-end Illumina RNA sequencing of Arabidopsis thaliana Col-0 siliques.

2016-11-16 | GSE89617 | GEO

Expression data from Arabidopsis thaliana Col-0 challenged with Ralstonia solanacearum race 4 (roots)

Project description:Bacterial wilt caused by Ralstonia solanacearum is a serious seed/soil borne disease that causes severe yield and quality losses in many plants. In order to understand the change in genome expression of inculated plants, microarray analysis were performed. Twenty one days old roots of Arabidopsis Col-0 were inoculated with Ralstonia solanacearum race 4 @ 10^9 & 10^8 cfu/ml in different plants, distil water were mock inoculated, after five days plants were taken for RNA extraction and hybridization on Affymetrix microarrays. Plants were incubated in growth chamber for disease development, temperature and humidity were maintained as per plant requirement for both treated and control plants.

2016-12-21 | GSE92631 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data