Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Pseudomonas fulva

ABSTRACT: class 3 integron

PROVIDER: PRJDB6447 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR107778_1.fastq.gz	Fastqsanger.gz
	DRR107778_2.fastq.gz	Fastqsanger.gz
	DRR129261_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Pseudomonas aeruginosa

Project description:16s rRNA gene in Pseudomonas aeruginosa, class 1 integron

| PRJDB13537 | ENA

Polymicrobial ventriculitis involving Pseudomonas fulva.

Project description:Infections due to Pseudomonas fulva remain a rare but emerging concern. A case of ventriculitis due to Enterobacter cloacae and Pseudomonas fulva following placement of an external ventricular drain is described. Similar to other reports, the organism was initially misidentified as Pseudomonas putida. The infection was successfully treated with levofloxacin.

| S-EPMC4042776 | biostudies-literature

First report of bloodstream infection caused by Pseudomonas fulva.

Project description:Pseudomonas fulva has not yet been isolated from humans as a pathogen. Herein, we report the first case of P. fulva bacteremia in a patient hospitalized due to trauma. The species was identified using biochemical and molecular genetic analyses of the 16S rRNA, gyrB, rpoB, and rpoD genes.

| S-EPMC2897531 | biostudies-literature

Project description:Sequencing of class 1 integron in WWTPs

| PRJNA1111236 | ENA

Project description:clone library of class 1 integron in WWTPs

| PRJNA421077 | ENA

Pseudomonas fulva

Project description:Rice paddy bacterium

| PRJNA49699 | ENA

Pseudomonas fulva

Project description:Pseudomonas fulva Genome sequencing

| PRJNA678216 | ENA

Pseudomonas fulva

Project description:Pseudomonas fulva Genome sequencing and assembly

| PRJNA398728 | ENA

aquatic metagenome

Project description:Class 1 integron gene cassettes in rivers in Japan

| PRJDB12624 | ENA

High quality draft genome sequences of Pseudomonas fulva DSM 17717(T), Pseudomonas parafulva DSM 17004(T) and Pseudomonas cremoricolorata DSM 17059(T) type strains.

Project description:Pseudomonas has the highest number of species out of any genus of Gram-negative bacteria and is phylogenetically divided into several groups. The Pseudomonas putida phylogenetic branch includes at least 13 species of environmental and industrial interest, plant-associated bacteria, insect pathogens, and even some members that have been found in clinical specimens. In the context of the Genomic Encyclopedia of Bacteria and Archaea project, we present the permanent, high-quality draft genomes of the type strains of 3 taxonomically and ecologically closely related species in the Pseudomonas putida phylogenetic branch: Pseudomonas fulva DSM 17717(T), Pseudomonas parafulva DSM 17004(T) and Pseudomonas cremoricolorata DSM 17059(T). All three genomes are comparable in size (4.6-4.9 Mb), with 4,119-4,459 protein-coding genes. Average nucleotide identity based on BLAST comparisons and digital genome-to-genome distance calculations are in good agreement with experimental DNA-DNA hybridization results. The genome sequences presented here will be very helpful in elucidating the taxonomy, phylogeny and evolution of the Pseudomonas putida species complex.

| S-EPMC5009691 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data