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Pseudomonas fulva

ABSTRACT: Rice paddy bacterium

PROVIDER: PRJNA49699 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	DRR107778_1.fastq.gz	Fastqsanger.gz
	DRR107778_2.fastq.gz	Fastqsanger.gz
	DRR129261_1.fastq.gz	Fastqsanger.gz
	SRR13387006_1.fastq.gz	Fastqsanger.gz

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Project description:We present the draft genome of Nitrospirae bacterium Nbg-4 as a representative of this clade and couple this to in situ protein expression under sulfate-enriched and sulfate-depleted conditions in rice paddy soil. The proteins were extracted from the soil and analysed via LC-MS/MS measurements.

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Rice leaves in the field in 2009

Project description:Time-course transcriptional profiling of rice leaf in the field in 2009. This experiment was performed to validate the results of field transcriptomic modeling. Using 461 field transcriptome data obtained in 2008 (GSE36040; GSE36042; GSE36043; GSE36044; GSE18685) and the corresponding meteorologicla dara, we perfomred statistical modeling of transcriptome. Rice leaves (Norin8 vs. osgi) in the paddy field were collected on Aug. 10 - 12, 24 - 25, 31, Oct. 8 - 9 in 2009.

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Gene expression of cytosolic glutamine synthetase 1;1 knock-out mutant rice

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Project description:Macronutrients are pivotal elements for proper plant growth and development. We performed microarray analysis of rice leaves under nitrogen (N), phosphorus (P), and potassium (K) deficiency conditions in paddy field to obtain a global view of gene regulations associated with plant response to essential nutrients.

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